PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022134071.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

LBD

Protein Properties

Length: 217aa MW: 23307.6 Da PI: 8.5852

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022134071.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	131.5	3.5e-41	30	129	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrr+Ca++C+++pyf ++p+kfa vhk+FGasnv k+l ++pe++r da++slvyeA+ r+rdPvyG++g i++lq+ql++l+a+l+ XP_022134071.1 30 PCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLN 124 7********************************************************************************************** PP DUF260 96 llkee 100 ++++e XP_022134071.1 125 SIRSE 129 99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence
MKRETEVLCS GNNYRHILSS NGGRLNTITP CAACKLLRRR CAQECPFSPY FSPHEPHKFA 60 SVHKVFGASN VAKMLMEVPE SQRADAANSL VYEANLRLRD PVYGCMGAIS ALQHQLQTLQ 120 ADLNSIRSEI LKYKYRDAII PSSSSSPHIA LISGAAGVVV STTATPPAAP PTPPHSQPPP 180 LSLPPPPPSS SAIYSSPISS AAPEFNTISA EHISYFA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30340.1	1e-71	LBD family protein