PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022134081.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

HD-ZIP

Protein Properties

Length: 301aa MW: 33344.2 Da PI: 6.9065

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022134081.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.8	3.9e-18	82	134	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + +++ eq+++Le+ Fe +++ e++ +LAk lgL+ rq+ +WFqNrRa++k XP_022134081.1 82 KKRLNLEQVKALEKSFEVGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWK 134 4568889*********************************************9 PP
2	HD-ZIP_I/II	127.6	5.1e-41	80	171	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekk+rl+ eqvk+LE+sFe +kLeperK++la++Lglqprq+a+WFqnrRAR+ktkqlE+dye+Lk+++++lk++n+ L++++++L+++l XP_022134081.1 80 EKKKRLNLEQVKALEKSFEVGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLERDYEVLKKQFESLKADNDVLQAQNSKLHAQLL 171 69**************************************************************************************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MASPHSHSFM FQSRAATDHQ DFVPSSSFNA IPSCPPHLYF HDGVVPFMMK RSMSFSGVEN 60 GCEEVNGEEG LSDDGSALGE KKKRLNLEQV KALEKSFEVG NKLEPERKMQ LAKALGLQPR 120 QIAIWFQNRR ARWKTKQLER DYEVLKKQFE SLKADNDVLQ AQNSKLHAQL LALKTKDSGE 180 TAAGGGATLK KENEGGCWSS DNSCDINLEM SRTQPITTNG GGRGCSQPGI KELFPSAASF 240 RSAAITQLLQ QGSSTRSGVE HHPQVIQEES FSHMFNGIEE QQQSAAAGFW PWTSDQSTHF 300 H

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	129	137	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01220.1	7e-84	HD-ZIP family protein