PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022134328.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 240aa MW: 27320.7 Da PI: 7.0867

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022134328.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54	3.9e-17	7	54	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll ++v+ +G g+W+++a g++R +k+c++rw +yl XP_022134328.1 7 KGPWTPEEDRLLSQYVEVHGEGRWTSVAIGSGLNRNGKSCRLRWVNYL 54 79********************************************97 PP
2	Myb_DNA-binding	51.2	2.9e-16	64	104	5	47
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +++E+ +++++++++G++ W+tIar+++ gRt++++k++w+++ XP_022134328.1 64 SPQEEAIIIELHALWGNR-WSTIARYLP-GRTDNEIKNYWRTH 104 89**************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MEQGWTKGPW TPEEDRLLSQ YVEVHGEGRW TSVAIGSGLN RNGKSCRLRW VNYLRPGLKR 60 CHLSPQEEAI IIELHALWGN RWSTIARYLP GRTDNEIKNY WRTHFKKPKL EKKLEMKKTI 120 TTATSQKQPK RKAHNNNKTA QTTSKYEEKL SDEQNQMMMK PCGREDSAVV FADPDAMADH 180 QCFLYEDFTS WAAVAAATAE DVLWSGVWDA ADQSDQVLGG SSLCLGEDDS NIFCNGGFFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30210.1	2e-61	MYB family protein