PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022134346.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 252aa MW: 27997 Da PI: 8.8567

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022134346.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.7	4.2e-13	72	118	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+++E+rRRdriN ++ Lr+l+Pk+ K++Ka+ L A++ +k+L XP_022134346.1 72 KSHSQAEKRRRDRINAQLAILRKLVPKS-----DKMDKAALLGSAIDQVKDL 118 79***********************8.....7***********99988 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
MEENWDCSTK PEGLNWAHCN SNSSREPPSL LLPWMINPQL SSSTELQFDG FPSFSTPSEG 60 IIAEDRGASA SKSHSQAEKR RRDRINAQLA ILRKLVPKSD KMDKAALLGS AIDQVKDLKR 120 KAIEVSKNMT VPTDMDEVTI DSAMVEDNHS TDNIAIKVSV SCDDRPELFT ELIQVIKGLR 180 LTTIRADMAS VGGRIKSILV LCNKDGERSV CLNTVQQSLK LVLSRMSSSS TASTCRIRSK 240 RQRFFLPSHF SK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40200.1	1e-42	bHLH family protein