PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022134454.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

HD-ZIP

Protein Properties

Length: 278aa MW: 32068.5 Da PI: 4.375

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022134454.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	63	4.4e-20	65	118	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq++ Le+ Fe ++++ e+++eLAk+lgL+ rqV vWFqNrRa++k XP_022134454.1 65 KKRRLTQEQVNLLENSFEAENKLEPERKTELAKRLGLQPRQVAVWFQNRRARWK 118 5678*************************************************9 PP
2	HD-ZIP_I/II	125.8	2e-40	64	156	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrl++eqv+lLE+sFe+e+kLeperK+ela++LglqprqvavWFqnrRAR+ktkqlE+dy+ Lk +y + +++ + + ke+e+L++e+++ XP_022134454.1 64 EKKRRLTQEQVNLLENSFEAENKLEPERKTELAKRLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKLSYGSFRSNFDFIVKENERLKAEVAS 156 69*****************************************************************99999998888888888888888764 PP

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence
MMSDGLIFNQ SPVQGNLLFF GSEDSILRGP RFTMGMDETS KRRSFFSSPD ELFDDDYYDD 60 QPPEKKRRLT QEQVNLLENS FEAENKLEPE RKTELAKRLG LQPRQVAVWF QNRRARWKTK 120 QLERDYDLLK LSYGSFRSNF DFIVKENERL KAEVASLTEK LQAKEVVESS FQAKKPEPIL 180 EDQLLVPVVQ HSMKIEDHHS CRSNGSAVLD EDGPQLLDSG DSYLLRNDYD GCVLPVFGAN 240 SEEEDGSDDG QGYFSDVYTA ADLQTHEVEP LTWWDWTS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	113	121	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	2e-83	HD-ZIP family protein