PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022134677.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family ARR-B
Protein Properties Length: 691aa    MW: 75367.4 Da    PI: 6.0193
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022134677.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like91.95.5e-29211264155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     kpr++W+ eLH++Fv+av+qL G ekA+Pk+il+lm+v+gLt+e+v+SHLQkYRl
  XP_022134677.1 211 KPRVVWSVELHRKFVSAVNQL-GLEKAVPKKILDLMNVEGLTRENVASHLQKYRL 264
                     79*******************.********************************8 PP
2Myb_DNA-binding40.37.5e-13213263148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W+ e++ ++v av+qlG +   +k+I   m+ +g+t++++ s++qky+
   XP_022134677.1 213 RVVWSVELHRKFVSAVNQLGLEkaVPKKILDLMNvEGLTRENVASHLQKYR 263
                      678***********************************************7 PP
3Response_reg81.23.3e-27261341109
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     vl vdD+p+ +++l+++l++ +y +v++++++ eal++l+e++  +Dl++ D++mp+mdG++ll+    e ++lp+i+++ah++ e++ + +  G
  XP_022134677.1  26 VLAVDDDPICLKVLESLLRRCRY-HVTTTKQSIEALRMLRENRnkFDLVISDVNMPDMDGFKLLECVGLE-MDLPVIMLSAHSDTELVMKGITHG 118
                     799********************.***************999889********************99664.48********************** PP

                     ESEEEESS--HHHHHH CS
    Response_reg  94 akdflsKpfdpeelvk 109
                     a d+l Kp+ +eel +
  XP_022134677.1 119 ACDYLLKPVRIEELKN 134
                     *************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 691 aa     Download sequence    
MTVEGHSVAS AGEDGAADRF PVGMRVLAVD DDPICLKVLE SLLRRCRYHV TTTKQSIEAL  60
RMLRENRNKF DLVISDVNMP DMDGFKLLEC VGLEMDLPVI MLSAHSDTEL VMKGITHGAC  120
DYLLKPVRIE ELKNIWQHVI RRKKLEPKAK NKFPNQDKAR NGGGEGEQGF SSTSNAENAK  180
FNRKRKDQDE DDDEEGKENG HDSDDPSNQK KPRVVWSVEL HRKFVSAVNQ LGLEKAVPKK  240
ILDLMNVEGL TRENVASHLQ KYRLYLKRIS NVASQQANMV ATFGSKDGTY MRIGSLDGYA  300
DLHGFAGSGR LPNSTLSSYS PAGILGRLNS PAGMSLRGIA SSGLIQQSSQ NLNCAINTLG  360
KIQPSTMLPP SQTTSLMQGT PMSLELSQLE HSKSSAPIGE FNTMNETSGF GVPNSFSDTR  420
VNIGNSTNSV SRSPLMLQGT MAAYGNQTSL RVDPSNGETF DIETSGSNFL DPDLPNENWQ  480
GAAQLSRFSA TSLTPNEAYN NDQLHAINST ISSTPSTIGS IPVDFSTRSA VSAPLQDSRN  540
MQCQAGLGSV IQAMNSMPKQ SWEEHRYDYS QNVQHNLSAI NSMVPSNGTL MSQSLNQNNI  600
GCDRKVSSSL IVPPNAAALH SVLEKLGPNA RVDADGNYVL NQTKSHGASI QGSFESLDDI  660
MNAMIKREQN EISEMNGEFG FDNYSLGSSC I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-131ARR-B family protein