PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022134704.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family TCP
Protein Properties Length: 325aa    MW: 37046.4 Da    PI: 9.7517
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022134704.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP1289.4e-40732112131
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa....sec......eaesssssasnss 86 
                       k+drhski T +g+RdRR+Rls+++a++fF Lqd+LG+dk+skt+eWLl q+ +aik+l +++s+s+    + +      +a+  ++ ++n++
  XP_022134704.1  73 SSKRDRHSKINTLRGPRDRRMRLSLPVARQFFGLQDMLGVDKASKTVEWLLFQSRHAIKKLSRDNSPSSvsdgE-VvsgideTAAVVVVDDNNKK 166
                     579*************************************************************7777754441.13444422333333333555 PP

             TCP  87 sgkaaksaakskksqksaasalnlakesrakarararertrekmr 131
                     +g++a +++k+ ++ +++a ++  a+e r+kararar rtrek+ 
  XP_022134704.1 167 EGRKAMAKEKRGRAARKTALFHPRARECREKARARARARTREKQL 211
                     55999999999999999999999999****************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MFMFNSSNHG HNPISFPDHS NFHFPSPFDD TPGLILQQED IFLHHPSNFT NVSTDHVMSN  60
MAEQQQSQRK RASSKRDRHS KINTLRGPRD RRMRLSLPVA RQFFGLQDML GVDKASKTVE  120
WLLFQSRHAI KKLSRDNSPS SVSDGEVVSG IDETAAVVVV DDNNKKEGRK AMAKEKRGRA  180
ARKTALFHPR ARECREKARA RARARTREKQ LQIREKLLSE GNPIEEIEGR KQDVSKISSS  240
GSEESAGTHQ QIDNQQLRRR DEGIIIDDDP DHDCLMMMGR PWSPSSNSII YNSLHNNNGS  300
PQEHPFGDFQ FIGKPWEAYN NHGIC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18550.24e-21TCP family protein