PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022134755.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family Nin-like
Protein Properties Length: 304aa    MW: 34820.4 Da    PI: 5.2297
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022134755.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK84.41e-26130180252
          RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                     +k +s +++s+yF++pi++AAkeL+v+lT+LK++CR++GI+RWPhRk+ sl
  XP_022134755.1 130 SKMLSRKTISQYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSL 180
                     57899*******************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MGTTWRSNFE DPFPSSCHPP LHFSYNSGLD WAQCNFGLQE SVFDVVPLFE SCPVEDIEPI  60
NTYISEDVLR GYGDGVGIWG EMEAGFGFQK QPLLLEGSGG LSENGERSKE RVMRGRRKCR  120
ESSNNGSSSS KMLSRKTISQ YFYMPITQAA KELNVGLTLL KKRCRELGIR RWPHRKLMSL  180
QTLIKNVKEL REGEEERNGV KLRNVLEILE EEKKVMEERP DLQLEDNTKR LRQACFKANY  240
KKRKLSGMRM TNNDSQCFSG PAAAARGMFR GEEEEDEEED EDEEMKYLLS DCSFSSSSCC  300
SMMM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.12e-51Nin-like family protein