PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022134791.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

HD-ZIP

Protein Properties

Length: 219aa MW: 24899.4 Da PI: 9.7545

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022134791.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.4	2.5e-18	90	144	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq + Lee F+ + +++ ++++ LA++l+L++rqV vWFqNrRa+ k XP_022134791.1 90 RKKLRLSKEQSNLLEESFKLHTTLNPAQKQALAQQLNLKTRQVEVWFQNRRARTK 144 788899***********************************************98 PP
2	HD-ZIP_I/II	119.3	2e-38	90	178	1	89
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rlskeq++lLEesF+ +++L+p +K++la++L+l++rqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l+een+rL+kev+eLr+ XP_022134791.1 90 RKKLRLSKEQSNLLEESFKLHTTLNPAQKQALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKEVQELRS 178 69*************************************************************************************93 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MGGDDEICNI RLGLGLGFGE EYVPKKKINN HNPKFFSDLS FTLIPKEEAI NVEIEASSSD 60 HDHLKRIRSN NNQDQIRDSS SIVINGSSER KKLRLSKEQS NLLEESFKLH TTLNPAQKQA 120 LAQQLNLKTR QVEVWFQNRR ARTKLKQTEV DCEFLKKCCE RLNEENRRLK KEVQELRSLK 180 IGASQLYIQL PKAATLTICP SCNKLTRNAA ATAAAPLPQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	139	147	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	3e-45	HD-ZIP family protein