PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022134802.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family ARR-B
Protein Properties Length: 369aa    MW: 41457.3 Da    PI: 7.1013
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022134802.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like568.5e-18137189154
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 
                     kpr+ Wt+e H++Fv+a eqL  + + +Pk+il++m+ + L++e ++SHLQk+R
  XP_022134802.1 137 KPRVIWTKERHAKFVQAYEQL-EEMERVPKKILKMMNEPELSRESIASHLQKHR 189
                     79*******************.66678**************************9 PP
2Myb_DNA-binding26.81.2e-08141189348
                      SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                       WT+e + ++v+a +ql      +k+I ++m+   ++++++ s++qk++
   XP_022134802.1 141 IWTKERHAKFVQAYEQLEEMerVPKKILKMMNePELSRESIASHLQKHR 189
                      5****************97799***********99************97 PP
3Response_reg64.45.7e-22291331104
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     vl +d + + ++ l  +l+k +y +v++++++ ea++llk+++  +D++++D+   +mdG++ll +i+ +++++p+++++a++e e++++ +  G
  XP_022134802.1  29 VLAIDANIVCLKYLVLLLRKCQY-KVTATTEAAEAIRLLKDEKeaFDIVITDVVRLDMDGFKLLNTITDHAMDIPVVMISANDELEMVKRSVMEG 122
                     6778888899999**********.***************888888************************************************** PP

                     ESEEEESS--H CS
    Response_reg  94 akdflsKpfdp 104
                     a+ +l Kp+  
  XP_022134802.1 123 AEAYLLKPVRL 133
                     ********875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    
MEEKKDHSNG LLSMQQKGED ENFPIGLKVL AIDANIVCLK YLVLLLRKCQ YKVTATTEAA  60
EAIRLLKDEK EAFDIVITDV VRLDMDGFKL LNTITDHAMD IPVVMISAND ELEMVKRSVM  120
EGAEAYLLKP VRLPEKKPRV IWTKERHAKF VQAYEQLEEM ERVPKKILKM MNEPELSRES  180
IASHLQKHRD GLRKKILGGG GGVGKFVSQK NYYSSLKHQI RNKASNFSTA NLRAEIPTSA  240
QFQYPSIPSG LSSRSCYFPV PEFKWFNFPT DNNSSSMILK PCDQYLGFGS SNIISPLGGD  300
RLNYSTTSQT FGNCPIDNVG ATRWPFPNNA TTTGQYSELQ FDNGSSYGGG LTDEDISDIF  360
RILSEGPNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.14e-32ARR-B family protein