PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022134978.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NF-YB
Protein Properties Length: 160aa    MW: 18020.4 Da    PI: 4.3941
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022134978.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB76.92.9e-241199391
           NF-YB  3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyr 91
                    ++d+ lP a +++i+k++lP + ++++da++++ ec +efi +v+se+++ c +e+++ti+++ +l al  lGf +y+e++ +  +++r
  XP_022134978.1 11 KEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHR 99
                    6899***************************************************************************9977666655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MEPMDIVGKS KEDASLPKAT MTKIIKEMLP PDVRVARDAQ DLLIECCVEF INLVSSESNE  60
VCSKEEKRTI APEHVLKALE VLGFSEYIEE VYAAYEQHRL ETMKSLQQDS LKGGKWSNGA  120
EMTEEEALAE QQRMFAEARA RMNGNNTAPK QPEPEQSLES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23090.24e-91NF-YB family protein