PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022135205.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NAC
Protein Properties Length: 257aa    MW: 29083.4 Da    PI: 8.7776
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022135205.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM103.72.4e-32131751128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk...leleevikev.diykvePwdLpk..kvka..eekew.yfFskrdkkyatgkrknratksgyWkat 86 
                     lppGfrF+Pt++elv eyLk k+ +++   + ++++i+e+ d+++++Pwd+p   +v +  +e+e+ y Fsk+++ + +    +r+t sgyWk t
  XP_022135205.1  13 LPPGFRFEPTEQELVFEYLKCKLLSSSsslNLCASIIPEIlDVCNFDPWDIPVpvRVGGdgNEEEMrYLFSKNRNGNGN---GKRSTPSGYWKPT 104
                     79********************9999856422345799999**********9544444433333446999999887665...567899******* PP

             NAM  87 gkdkevlsk..........kgel..............vglkktLvfy.......kgrapkgektdWvmheyrl 128
                     g+d++++++          +  +              vg+kktLvf+       k ++ + ++++Wvmhey+l
  XP_022135205.1 105 GRDTKIVASsspsnsnwssN--KnnnsyssssssstsVGIKKTLVFFstskakgKTKRMRRTRSRWVMHEYSL 175
                     *******9877766665541..156677777788888**********666553323444445899******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MDKLVRFDGI RGLPPGFRFE PTEQELVFEY LKCKLLSSSS SLNLCASIIP EILDVCNFDP  60
WDIPVPVRVG GDGNEEEMRY LFSKNRNGNG NGKRSTPSGY WKPTGRDTKI VASSSPSNSN  120
WSSNKNNNSY SSSSSSSTSV GIKKTLVFFS TSKAKGKTKR MRRTRSRWVM HEYSLFLPTQ  180
TQMDHTENNW VVCRIFCSNN NNTTTTNYES DFMMMDPNHM DMEEIDDMHY GRRRPCTSTT  240
VSSSSSSSSS SSYNPHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.12e-27NAC family protein