PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022135206.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NAC
Protein Properties Length: 254aa    MW: 28728.9 Da    PI: 8.5712
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022135206.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1042e-32131721128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk...leleevikev.diykvePwdLpk.kvkaeekew.yfFskrdkkyatgkrknratksgyWkatgkd 89 
                     lppGfrF+Pt++elv eyLk k+ +++   + ++++i+e+ d+++++Pwd+p    +++e+e+ y Fsk+++ + +    +r+t sgyWk tg+d
  XP_022135206.1  13 LPPGFRFEPTEQELVFEYLKCKLLSSSsslNLCASIIPEIlDVCNFDPWDIPVpGGDGNEEEMrYLFSKNRNGNGN---GKRSTPSGYWKPTGRD 104
                     79********************9999856422345799999**********9533333444545999999887665...567899********** PP

             NAM  90 kevlsk..........kgel..............vglkktLvfy.......kgrapkgektdWvmheyrl 128
                     ++++++          +  +              vg+kktLvf+       k ++ + ++++Wvmhey+l
  XP_022135206.1 105 TKIVASsspsnsnwssN--KnnnsyssssssstsVGIKKTLVFFstskakgKTKRMRRTRSRWVMHEYSL 172
                     ****9877766665541..156677777788888**********666553323444445899******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MDKLVRFDGI RGLPPGFRFE PTEQELVFEY LKCKLLSSSS SLNLCASIIP EILDVCNFDP  60
WDIPVPGGDG NEEEMRYLFS KNRNGNGNGK RSTPSGYWKP TGRDTKIVAS SSPSNSNWSS  120
NKNNNSYSSS SSSSTSVGIK KTLVFFSTSK AKGKTKRMRR TRSRWVMHEY SLFLPTQTQM  180
DHTENNWVVC RIFCSNNNNT TTTNYESDFM MMDPNHMDME EIDDMHYGRR RPCTSTTVSS  240
SSSSSSSSSY NPHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.16e-28NAC family protein