PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022135226.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family TCP
Protein Properties Length: 334aa    MW: 37358.6 Da    PI: 9.0473
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022135226.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP874.4e-27501673103
             TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......................ssssasece 74 
                     g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+L + ++sk i+WLl   k  i++l+ +                       ssss+++c 
  XP_022135226.1  50 GGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLqipagfsqfhhpmslfpaqydysSSSSSQFC- 143
                     79*************************************************************6666665444444444433333322222222. PP

             TCP  75 aesssssasnsssg........kaaksaakskksqks 103
                                  +         + +++++ ++++ +
  XP_022135226.1 144 -------------SlphpfavdTKDSTTTHLNQTTME 167
                     .............033444443222222222222222 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MLRDSKEKGC EAKQEGIIDG KYSFPRAPTS SRQWSGFRNP RIVRVSRSFG GKDRHSKVCT  60
IRGLRDRRIR LSVPTAIQLY DLQDKLKLGQ PSKVIDWLLD VTKLDIDKLP PLQIPAGFSQ  120
FHHPMSLFPA QYDYSSSSSS QFCSLPHPFA VDTKDSTTTH LNQTTMEKTK LWDTDLVPQE  180
KASLATKGKW IDHGSNSQQV EDYNEQISAQ KFISINNYSN SYHYNTCDHQ HSQFGNNNNG  240
VFPSQVEAQT SSSSGSALFF TPYASYITNP FESHIHFLSS NSHALPNPFM PPNSPLQPFG  300
SQNLKPFPAN FNLKQLLHDG GSGKDGADGN SRAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60970.11e-48TCP family protein