PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022135284.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family LFY
Protein Properties Length: 370aa    MW: 42230.5 Da    PI: 6.5907
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022135284.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY615.31.2e-18713601386
         FLO_LFY   1 mdpeafsaslfkwdpraaaaapparlleeaavseapleaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslse 95 
                     mdpea+s +lfkwdpr     pp  l+        p       +  +l +leelf+ayG+ry+t+akiaelGftvstL+dmkdeel+d+m+sls+
  XP_022135284.1   1 MDPEALSGTLFKWDPRGLP--PP--LQ--------P------YSLGRLGGLEELFQAYGIRYYTAAKIAELGFTVSTLLDMKDEELEDMMNSLSH 77 
                     8888888888888887542..33..21........1......12334789********************************************* PP

         FLO_LFY  96 ifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeet.aldalsqeglseepvqe.ekeaagsggeglgeaelvaaeekkseeekkka 188
                     ifr+dllvGeryGikaavraerrrl++e ++++rr+l+s+d++t +ldalsqeglseepvq+ eke +gsgg+g  ++e+va++e+k ++++++ 
  XP_022135284.1  78 IFRWDLLVGERYGIKAAVRAERRRLDDEIDSSRRRHLFSNDTTTnVLDALSQEGLSEEPVQQqEKEVVGSGGGG--SWEAVAVAERKLKQRRRNG 170
                     ****************************99********99988779**************99566677887777..9999999854443333322 PP

         FLO_LFY 189 skkkqkrkkkkelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtkvtn 283
                          k+k+ ++ + eed+de++   e+++++  + +erqrehPfivtepgevargkknGLDYLf+LyeqCrefL+qvq+iakerGekcPtkvtn
  XP_022135284.1 171 -----KKKQ-QQ-VIEEDHDENDGAGEEDQDNI-EVNERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTKVTN 257
                     .....2222.22.23344444444444444443.4679********************************************************* PP

         FLO_LFY 284 qvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLrqLC 378
                     qvfryakkagasyinkPkmrhYvhCYalhcL+ee+snalrr fkergenvGawrqacykplvaia  qgwdida+fnahprL+iWYvPtkLrqLC
  XP_022135284.1 258 QVFRYAKKAGASYINKPKMRHYVHCYALHCLNEEESNALRRVFKERGENVGAWRQACYKPLVAIAGAQGWDIDAIFNAHPRLAIWYVPTKLRQLC 352
                     *********************************************************************************************** PP

         FLO_LFY 379 hlerskas 386
                     h+er++a+
  XP_022135284.1 353 HAERNSAT 360
                     ****9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    
MDPEALSGTL FKWDPRGLPP PLQPYSLGRL GGLEELFQAY GIRYYTAAKI AELGFTVSTL  60
LDMKDEELED MMNSLSHIFR WDLLVGERYG IKAAVRAERR RLDDEIDSSR RRHLFSNDTT  120
TNVLDALSQE GLSEEPVQQQ EKEVVGSGGG GSWEAVAVAE RKLKQRRRNG KKKQQQVIEE  180
DHDENDGAGE EDQDNIEVNE RQREHPFIVT EPGEVARGKK NGLDYLFHLY EQCREFLIQV  240
QNIAKERGEK CPTKVTNQVF RYAKKAGASY INKPKMRHYV HCYALHCLNE EESNALRRVF  300
KERGENVGAW RQACYKPLVA IAGAQGWDID AIFNAHPRLA IWYVPTKLRQ LCHAERNSAT  360
ASTSADHLPF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1161173RKLKQRRRNGKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.11e-152LFY family protein