PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022135411.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 249aa MW: 28386.5 Da PI: 5.1979

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022135411.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.1	6.3e-16	24	71	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT++Ed ll++ + +G g+W++ a + g++Rt+k+c++rw++yl XP_022135411.1 24 RGPWTADEDSLLIRSISVHGEGRWNLLAIRSGLRRTGKSCRLRWLNYL 71 89********************************************97 PP
2	Myb_DNA-binding	45.5	1.8e-14	77	120	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ ++ E++l++d++ ++G++ W++Ia++++ gRt++++k++w++ XP_022135411.1 77 RGSLSPHEQLLILDLHCRWGNR-WSKIAQELP-GRTDNEIKNYWRT 120 78889***************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MAKSQTSSCS SSTVVEDDQI GLRRGPWTAD EDSLLIRSIS VHGEGRWNLL AIRSGLRRTG 60 KSCRLRWLNY LKPDVKRGSL SPHEQLLILD LHCRWGNRWS KIAQELPGRT DNEIKNYWRT 120 RVQRQAKLLN IDTNSPEFKD IINRFWIPRL VQQIHEESSN SSPPSSSSSS SPQLSDSDEK 180 RPRFVTAEED EKVTGSDPLL FSDVVPSWNH GGGGDMGDFD YPIGEFTSWM EEDDSDCGGL 240 WNFEGLWQF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25340.1	3e-67	MYB family protein