PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022135433.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB
Protein Properties Length: 268aa    MW: 30803.5 Da    PI: 9.7157
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022135433.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.94e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +lv +++q G+g+W+++++  g+ R+ k+c++rw +yl
   XP_022135433.1 14 KGPWTPEEDIILVSYIQQNGPGNWRSVPSNTGLLRCSKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding46.86.7e-1567112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg +T  Ed  ++++ ++lG++ W++Ia++++  Rt++++k++w+++l
   XP_022135433.1  67 RGQFTHHEDNMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 112
                      899*******************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MGRPPWCEKI GVKKGPWTPE EDIILVSYIQ QNGPGNWRSV PSNTGLLRCS KSCRLRWTNY  60
LRPGIKRGQF THHEDNMIIH LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLKKKVKNLQ  120
NGNFCKGRWE RRLQTDIQTA KQELREALSL SLIDKQNQVT HQSNNNPKLG HHEQQLFSYS  180
SSYASSAENI ARLLKNWTRN KNNNNSPDIN STTTTQNNYC NLSVEENSLT LLEKWLFDDA  240
AAAAAPQNHH QDFLNFSLQA DHTPSTIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47600.18e-86MYB family protein