PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022135444.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

C2H2

Protein Properties

Length: 508aa MW: 56455.3 Da PI: 5.8124

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022135444.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21	9.1e-07	260	281	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C +Cgk F+r nL+ H+r H XP_022135444.1 260 FCAICGKGFKRDANLRMHMRGH 281 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 508 aa Download sequence
MDPEDSLCSS EVWTKSSSFS NISTQQPAQK WVDTSILDYA MDQPFQEFDE PTESKTSLTC 60 NPTQQIDIPD KDSDQINAAL LASKIQDWDP RVMLNNLSFL EQKIHQLQEL VHLIVGRRSQ 120 ALARPDELVV QQQQLITADL TSIIVQLIST AGSLLPSVKH NLSAAVPPVG QLEQLDRVLF 180 ASGAGSSGVV QSQHDDGTKF PELPTQIDES SKCGKEQNMT MEEHELKDEE DVDESENLPP 240 GSYEILQLEK EEILAPHTHF CAICGKGFKR DANLRMHMRG HGDEYKTAAA LAKPNKEPST 300 ETVLIKRYSC PFTGCKRNKD HKKFQPLKTI LCVKNHYKRT HCDKSFTCSK CNSKKFSVIA 360 DLKTHEKHCG KDKWLCSCGT TFSRKDKLFG HIALFQGHTP AIPLDESKGT VGPCDRGERY 420 EAMNKHGSIN FSFGSGGSSV ENIADAKGVD DPLGYFSPLN FDSCNFGGFH EFPRPPFENT 480 ENAFSFLIPA SSNYNQKSGA ESSSNNLE

Sequence ? help Back to Top

Protein Sequence Length: 508 aa Download sequence

MDPEDSLCSS EVWTKSSSFS NISTQQPAQK WVDTSILDYA MDQPFQEFDE PTESKTSLTC  60
NPTQQIDIPD KDSDQINAAL LASKIQDWDP RVMLNNLSFL EQKIHQLQEL VHLIVGRRSQ  120
ALARPDELVV QQQQLITADL TSIIVQLIST AGSLLPSVKH NLSAAVPPVG QLEQLDRVLF  180
ASGAGSSGVV QSQHDDGTKF PELPTQIDES SKCGKEQNMT MEEHELKDEE DVDESENLPP  240
GSYEILQLEK EEILAPHTHF CAICGKGFKR DANLRMHMRG HGDEYKTAAA LAKPNKEPST  300
ETVLIKRYSC PFTGCKRNKD HKKFQPLKTI LCVKNHYKRT HCDKSFTCSK CNSKKFSVIA  360
DLKTHEKHCG KDKWLCSCGT TFSRKDKLFG HIALFQGHTP AIPLDESKGT VGPCDRGERY  420
EAMNKHGSIN FSFGSGGSSV ENIADAKGVD DPLGYFSPLN FDSCNFGGFH EFPRPPFENT  480
ENAFSFLIPA SSNYNQKSGA ESSSNNLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	0.0	C2H2 family protein