PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022135501.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family ARR-B
Protein Properties Length: 690aa    MW: 76406.7 Da    PI: 6.3427
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022135501.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like911e-28198251155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     kpr++W+ eLH++Fv+av+qL G++kA+Pk+il+lm+v+ Lt+e+v+SHLQkYRl
  XP_022135501.1 198 KPRVVWSVELHRKFVNAVNQL-GIDKAVPKKILDLMNVDKLTRENVASHLQKYRL 251
                     79*******************.********************************8 PP
2Myb_DNA-binding38.92e-12200250148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W+ e++ ++v+av+qlG +   +k+I   m+  ++t++++ s++qky+
   XP_022135501.1 200 RVVWSVELHRKFVNAVNQLGIDkaVPKKILDLMNvDKLTRENVASHLQKYR 250
                      678********************************99*************7 PP
3Response_reg78.22.8e-26201281109
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     vl vdD+p+ + +l+++l++ +y +v+++ ++  al+ll+e++  +D+++ D+ mp+mdG++ll+     e++lp+i+++a+g+++++ + +  G
  XP_022135501.1  20 VLAVDDDPTCLLILETLLRRCQY-HVTTTNQAVMALKLLRENKnkFDVVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGDPKLVMKGITHG 112
                     799********************.***************888888*******************87754.558********************** PP

                     ESEEEESS--HHHHHH CS
    Response_reg  94 akdflsKpfdpeelvk 109
                     a d+l Kp+ +eel +
  XP_022135501.1 113 ACDYLLKPVRIEELKN 128
                     *************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 690 aa     Download sequence    
MTVEPRVDDP TDQFPSGMRV LAVDDDPTCL LILETLLRRC QYHVTTTNQA VMALKLLREN  60
KNKFDVVISD VHMPDMDGFK LLELVGLEMD LPVIMLSANG DPKLVMKGIT HGACDYLLKP  120
VRIEELKNIW QHVIRRKKFD PKDRMNSDNL DKPDSETGEE AADSNGKFNK KRKDQNYNED  180
EDQDYNGQEN DDSSTQKKPR VVWSVELHRK FVNAVNQLGI DKAVPKKILD LMNVDKLTRE  240
NVASHLQKYR LYLKRISCVA NQQANMVTAL SSADPSYLRI GSLSGIGNFH SLSGPPQFPN  300
TAFRSIPTTG MLGRLNTPAC MGMHSLPSPG TVQLGSLNNP SNDQPAFQPI MLSGNRSGNI  360
FRGMPEPSEL DQLQHVKHGT HVDDLSPDFD ERTVFPASIG LPNATMTAGS LSNPLLGLTN  420
DPLISEVQHH EVHSGRKFGP QSSISVVSSN SESSRPSLDN ARCTGDNWSK AVHSSRIHLN  480
TIPSNNLSNI STSYHSHLRD NTTGALHIGN CLSDISSITS ISTQSRDSQT DSQCQVATTS  540
NKYDQVFKKV PVQNWNDHKE DAYYHTAVAC SSSNSLTPVN GAAETLPKHL ESHNTIFYGS  600
KDLNVTSQAN VLDHAMVEHD QFKKSAMETS LVLKQGYLYD QQQKMQARFS SSNCGSLEDI  660
ACAMMKQEQD DGKLLEGDFG CDSYPIGTCM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1135173RRKKFDPKDRMNSDNLDKPDSETGEEAADSNGKFNKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-135ARR-B family protein