PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022135507.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 246aa    MW: 27976.9 Da    PI: 4.9654
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022135507.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.52.4e-135597754
                    HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                      Er+RR+++N++++ Lr+++P+      +K++Ka+i + A++YI++L
  XP_022135507.1 55 LSERNRRRKLNERLFALRSVVPNI-----TKMDKASIIKDAINYIQDL 97
                    57*********************7.....7****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MDNIGEDYSY YWETNIVLPA EEIDSWGLDE AISGYYDSSS PEGVLSSSAA SKNILSERNR  60
RRKLNERLFA LRSVVPNITK MDKASIIKDA INYIQDLHEQ ERRIQAEIYE IESGKFKNIT  120
GYGFDQELPL LLRSKRKKTE QFSYDSAASR TSPIEVLDLS VTYMGERTMV VSLTCCKRAD  180
SMVKLCEVFE SLKLKIITAN ITAVSGRLLK TVFIEAEQEE RDYLKIKIES AIARLSLSDP  240
QSPMSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.19e-78bHLH family protein