PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022135612.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GATA
Protein Properties Length: 221aa    MW: 24112.4 Da    PI: 9.333
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022135612.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA62.45.4e-2078112135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C+ C+ttkTplWR gp g+k+LCnaCG+++rk+++
  XP_022135612.1  78 CVDCKTTKTPLWRGGPAGPKSLCNACGIRFRKRRV 112
                     ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MAALAAAPPR VFPFYPYPLS SLSHRFRSVS IYLLSFTHDS AFSGFNFNFL NKAEMGMMDV  60
LRRKNKVERV EDDTKKYCVD CKTTKTPLWR GGPAGPKSLC NACGIRFRKR RVSTIGTNRG  120
CDRKREKAHS HGGSTTAAMS ATTSSSATAA DAKSNNGGAD GEEEEEDLGE CGSLRMRLMM  180
ALGEEVVVQQ NISKQRPPRK LGEEEQAAVS LMALSCGSVF A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.13e-27GATA family protein