PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022135613.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GATA
Protein Properties Length: 220aa    MW: 24013.3 Da    PI: 9.333
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022135613.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA62.45.3e-2077111135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C+ C+ttkTplWR gp g+k+LCnaCG+++rk+++
  XP_022135613.1  77 CVDCKTTKTPLWRGGPAGPKSLCNACGIRFRKRRV 111
                     ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MAALAAAPPR VFPFYPYPLS SLSHRFRSVS IYLLSFTHDS AFSGFNFNFL NKAEMGMMDV  60
LRRKNKERVE DDTKKYCVDC KTTKTPLWRG GPAGPKSLCN ACGIRFRKRR VSTIGTNRGC  120
DRKREKAHSH GGSTTAAMSA TTSSSATAAD AKSNNGGADG EEEEEDLGEC GSLRMRLMMA  180
LGEEVVVQQN ISKQRPPRKL GEEEQAAVSL MALSCGSVFA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.14e-27GATA family protein