PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022135614.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GATA
Protein Properties Length: 167aa    MW: 18028.5 Da    PI: 8.9257
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022135614.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA633.4e-202458135
            GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                    C+ C+ttkTplWR gp g+k+LCnaCG+++rk+++
  XP_022135614.1 24 CVDCKTTKTPLWRGGPAGPKSLCNACGIRFRKRRV 58
                    ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MGMMDVLRRK NKVERVEDDT KKYCVDCKTT KTPLWRGGPA GPKSLCNACG IRFRKRRVST  60
IGTNRGCDRK REKAHSHGGS TTAAMSATTS SSATAADAKS NNGGADGEEE EEDLGECGSL  120
RMRLMMALGE EVVVQQNISK QRPPRKLGEE EQAAVSLMAL SCGSVFA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.12e-27GATA family protein