PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022135615.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GATA
Protein Properties Length: 166aa    MW: 17929.3 Da    PI: 8.9257
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022135615.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA633.4e-202357135
            GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                    C+ C+ttkTplWR gp g+k+LCnaCG+++rk+++
  XP_022135615.1 23 CVDCKTTKTPLWRGGPAGPKSLCNACGIRFRKRRV 57
                    ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MGMMDVLRRK NKERVEDDTK KYCVDCKTTK TPLWRGGPAG PKSLCNACGI RFRKRRVSTI  60
GTNRGCDRKR EKAHSHGGST TAAMSATTSS SATAADAKSN NGGADGEEEE EDLGECGSLR  120
MRLMMALGEE VVVQQNISKQ RPPRKLGEEE QAAVSLMALS CGSVFA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.13e-27GATA family protein