PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022135617.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 637aa MW: 72225.8 Da PI: 4.7874

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022135617.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.2	2.5e-12	382	425	7	55
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +Er+RR+++N+++ +Lr l+Pk + K++Ka+iL A++++k+Lq XP_022135617.1 382 VAERKRRKKLNERLYNLRALVPKiS------KMDKASILGDAIDFVKDLQ 425 68*******************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 637 aa Download sequence
MFQYYFQLSS GFNQSMQVAL IIFVIIQNLM ERLRPLVGCK GWDYCVLWKL SQDQRCIEWM 60 DCCCAGTENN QNGGEELVFP VSQVIPCRDT VCPHPRANSC DLLAQLPYSV PLNSGIYIQA 120 LLSNEPKWLL FSNGTDSKAL EETVGTRVLI PFPFGLVELF VARHATEDQH VIDFVTTQCS 180 ISIEQEAIMN SSNMDTSFSV NVNATNEIQS KPFLADQNVV LKDPDNQFEA PGSAEPTLEN 240 ANVGYDISLD RIRLCSSPMN FLQQFNYSSE NRNKNEIFHE CSQDSFLTDK QGNPYKFSAE 300 NEFQEVDMMQ RSLMNNTSNN HMQSKENTEC KEKQGEEKDL VKHENGRSDS ISDCSDQIDD 360 EDDALAKYRR RTGQGPQSKN LVAERKRRKK LNERLYNLRA LVPKISKMDK ASILGDAIDF 420 VKDLQKQVKE LQDELEEHSD DENGKTAITG NNGNQNSVHL PELLSQNDKA QNSYHMGVLG 480 SGSLLKQNHQ DTEGTNNDRT QQMEPQVEVA QIDGNEFFVK VFCENKRGGF MRLMEALNAL 540 GLEVTNANVT SYRGLVSNVF KVGKKDSEMV QADDVRDSLL EITKYPCRGW SEMAKAPDCM 600 GSRMDYQTHP HPSQNQHQIQ HPFQEKAINS RLHLLDD

Sequence ? help Back to Top

Protein Sequence Length: 637 aa Download sequence

MFQYYFQLSS GFNQSMQVAL IIFVIIQNLM ERLRPLVGCK GWDYCVLWKL SQDQRCIEWM  60
DCCCAGTENN QNGGEELVFP VSQVIPCRDT VCPHPRANSC DLLAQLPYSV PLNSGIYIQA  120
LLSNEPKWLL FSNGTDSKAL EETVGTRVLI PFPFGLVELF VARHATEDQH VIDFVTTQCS  180
ISIEQEAIMN SSNMDTSFSV NVNATNEIQS KPFLADQNVV LKDPDNQFEA PGSAEPTLEN  240
ANVGYDISLD RIRLCSSPMN FLQQFNYSSE NRNKNEIFHE CSQDSFLTDK QGNPYKFSAE  300
NEFQEVDMMQ RSLMNNTSNN HMQSKENTEC KEKQGEEKDL VKHENGRSDS ISDCSDQIDD  360
EDDALAKYRR RTGQGPQSKN LVAERKRRKK LNERLYNLRA LVPKISKMDK ASILGDAIDF  420
VKDLQKQVKE LQDELEEHSD DENGKTAITG NNGNQNSVHL PELLSQNDKA QNSYHMGVLG  480
SGSLLKQNHQ DTEGTNNDRT QQMEPQVEVA QIDGNEFFVK VFCENKRGGF MRLMEALNAL  540
GLEVTNANVT SYRGLVSNVF KVGKKDSEMV QADDVRDSLL EITKYPCRGW SEMAKAPDCM  600
GSRMDYQTHP HPSQNQHQIQ HPFQEKAINS RLHLLDD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	369	390	RRRTGQGPQSKNLVAERKRRKK
2	384	391	ERKRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	1e-126	bHLH family protein