PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022135638.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GRAS
Protein Properties Length: 441aa    MW: 49246.1 Da    PI: 7.0715
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022135638.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS290.15.8e-89474272373
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++lL++c  a++s+d +laq++++ l++ asp gdp+qRl+  f++AL +r++r +++ ++   +s+ ++     +l+ l+ ++++ P+++f++ 
  XP_022135638.1  47 EKLLVHCGGALESHDVTLAQQVMWVLNNVASPVGDPNQRLTCWFLRALISRVSRVCPTPMNFNGSSALER--RLMSLTELTRYVDLIPWHRFGFC 139
                     689***************************************************7777776655555542..33333344459************ PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl...vakr 185
                     +aN aI++a+e+  +vHi+Df+is+++QWp+L++aL++Rp+gppslRiT+ +   ++       ++e+g rLakfA++ ++pf+fnv+     ++
  XP_022135638.1 140 AANTAIYKAIERYPKVHILDFSISHCMQWPTLIDALSKRPQGPPSLRITVPSFRPQVpplLDLPTQEIGLRLAKFAHSKNIPFQFNVMdhiSPNK 234
                     *************************************************9988666688888999**********************98544457 PP

            GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsles.......erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdslea 273
                       ++++++L+++++Eal++n+++ l +l +e+++ ++       +rd+++++ k l+P++vvvv+++ad++s+s+  r++ +++y +  fd+le+
  XP_022135638.1 235 PISIDPSSLNLQQDEALVINCQHWLRYLSNEPHENKNdnnnscsPRDDFISATKCLNPQIVVVVDEDADTSSPSLTSRITASFNYLWIPFDALET 329
                     7788*************************8877766656667779************************************************** PP

            GRAS 274 klpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLv 368
                      l ++s +r  +E+  +g++i+n++  eg +r er e+ +k +er+++ G+ ++++ e+a++++k+ll++ + +g+ ++ e ++lvl+Wk+++ v
  XP_022135638.1 330 FLLKDSMQRLEYEAD-IGQRIENIIGFEGCQRMERSESCGKVSERMRNGGYLSASFCEEATAEVKALLAEQA-NGWGMKREGDALVLTWKGHNSV 422
                     ***************.******************************************************99.99******************** PP

            GRAS 369 svSaW 373
                     +v+aW
  XP_022135638.1 423 FVTAW 427
                     ***** PP
Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    
MRAELRGNNN GRSCISVHNS TLLNTAHGSL SGALKGCLGS LDGGCIEKLL VHCGGALESH  60
DVTLAQQVMW VLNNVASPVG DPNQRLTCWF LRALISRVSR VCPTPMNFNG SSALERRLMS  120
LTELTRYVDL IPWHRFGFCA ANTAIYKAIE RYPKVHILDF SISHCMQWPT LIDALSKRPQ  180
GPPSLRITVP SFRPQVPPLL DLPTQEIGLR LAKFAHSKNI PFQFNVMDHI SPNKPISIDP  240
SSLNLQQDEA LVINCQHWLR YLSNEPHENK NDNNNSCSPR DDFISATKCL NPQIVVVVDE  300
DADTSSPSLT SRITASFNYL WIPFDALETF LLKDSMQRLE YEADIGQRIE NIIGFEGCQR  360
MERSESCGKV SERMRNGGYL SASFCEEATA EVKALLAEQA NGWGMKREGD ALVLTWKGHN  420
SVFVTAWITN KRTNTCLDIS Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-111GRAS family protein