PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022135702.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB
Protein Properties Length: 277aa    MW: 31750.6 Da    PI: 5.8834
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022135702.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.14e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++eEde+l+ +v+++G  +W+  +r  g+ R++k+c++rw +yl
   XP_022135702.1 14 KGAWSAEEDEKLKAYVQKHGHCNWRELPRFAGLSRCGKSCRLRWINYL 61
                     79********************************************97 PP
2Myb_DNA-binding55.11.8e-1767112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ +++E+el++++++q+G++ W++Ia ++  gRt++++k++w+++l
   XP_022135702.1  67 RGNYSKDEEELILKLHQQHGNK-WSLIATRLS-GRTDNEIKNYWHTHL 112
                      899*******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MVRAPFYDEN GVKKGAWSAE EDEKLKAYVQ KHGHCNWREL PRFAGLSRCG KSCRLRWINY  60
LRPDVKRGNY SKDEEELILK LHQQHGNKWS LIATRLSGRT DNEIKNYWHT HLKKLKTSKV  120
TKKQQNEAIP KPKPIQKIES EINKTTFEND IIPSHQIVES SPVLSPLSSE LSSNVFSTQE  180
SAASTIDMAA EENSPAPTTV TSFSFQEPNN DNNADFWAHP FEAAENFLEV ESEDSIYFDS  240
IGGFNSPYDL IFDEDLLIYQ VMKELTQKMT SPNCMIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10280.16e-53MYB family protein