PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022135704.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 250aa MW: 28496.3 Da PI: 7.3699

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022135704.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.9	7.3e-16	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +l+ +vk++G +W++ ++ g+ R++k+c++rw +yl XP_022135704.1 15 KGIWTAEEDRRLIAYVKRYGHWNWRRLPKFAGLLRCGKSCRLRWMNYL 62 678***************99******99**********97 PP
2	Myb_DNA-binding	48.6	1.9e-15	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T +E+e + ++ + Gg+ W+t a+ m+ gRt++++k++w+++l XP_022135704.1 68 RGNFTLQEEETITKLYAAIGGR-WSTMAAQMP-GRTDNDIKNHWNTVL 113 89******************.*****.**********975 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MAKCCCFCDQ TTVKKGIWTA EEDRRLIAYV KRYGHWNWRR LPKFAGLLRC GKSCRLRWMN 60 YLRPNIKRGN FTLQEEETIT KLYAAIGGRW STMAAQMPGR TDNDIKNHWN TVLKRRVMMK 120 QQKMAMEKKP ATEKTGPTHQ VFAGDILNGS NVNNHSTLID QTAVEISALE DLPPAGNMDV 180 AADDQFKSST PELPAGSSPA SSAGDFWTDP LWLDSNLDMP FDEQLSYQGF GESNFFTFGL 240 DEYLWQEGIY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28110.1	4e-52	MYB family protein