PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022135753.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

HB-other

Protein Properties

Length: 1756aa MW: 197295 Da PI: 5.9685

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022135753.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	53.2	5e-17	19	73	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t++qle+Le+++ + yps++ r+eL+ klgL++rq ++WF+ rR k++k XP_022135753.1 19 KRKMKTASQLEILEKAYTVEAYPSEALRAELSVKLGLSDRQLQMWFCYRRLKDRK 73 89999************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1756 aa Download sequence
MECSCEGEKK PPAGANKIKR KMKTASQLEI LEKAYTVEAY PSEALRAELS VKLGLSDRQL 60 QMWFCYRRLK DRKAPSVKRP RKSSPAMAGA AVANPVGGSG EKIMAGNLGY ESSSGLGMGS 120 NVYAHPVDMR LAGQRPGVAN ARIGVNSPSM KRFYESQQSI AELRAMALIE AQLGEPLRED 180 GPVLGMEFDP LPPGAFGAPI GATTNIDEKK AGQVFEVSAY KQRDVEQIEH HQISGRTLHE 240 YKFLPEQPTV KLDRHERGAS SYQYDSHANV QNMSRTQSIA SGHSFLHGHE QVSSGYFSQG 300 QMPNLNIFSQ QSRRGHLLLS SMGEHDSSLC KSSLVNISMD PEYGTHRTTQ PEYTSILSDQ 360 SVVHGNNVLW IEKKHKNDEA RIAREVEAHE KRMRKELEKQ DALRRKREEQ IRKEMERHDR 420 ERQREEERLS REKQKEEERY LREQRRETLR REKFLRRESI RAERTRQKEA LRREREAARL 480 KAANQRAIAR RMAKESMELA DDERLELMEL AVSSKGLPSI MSLDHETLEN LELFEVMRPT 540 FPPESVKMKM PFLSHPWTDS EVNVGNLLMV WKFLVTFADV LGLWPFTLDE FVQAFHDHDS 600 RLLGEVHVAL LRCIIKDIED VTRSPSAGLG SNQSSAPNPG GGHLYVVEGA YAWGFDICSW 660 QHHLNPLTWP EILRQLALSA GFGPQLVKGG NAEPAYLRDE NEQGNDVAGI ISNLRNGLAA 720 ENAVAIMHER GLSNQRRSRH RLTPGTVKFA AFHVLSLEGS KGLPVVEVAD KIQKSGLRDL 780 TTSRTPEASI AAALSRDSKL FERTAPSTYC VRSPYRRDPG DADAILSTAR ERIHILKSGF 840 LDGEDAERND DSEVDVAEDP EVDDLGIEGN SMKEHQSHEV CPFDEMTSVT SGKGSNEVRD 900 SLEVGMENGG PYTSVLDFEG RVKGEESPIE QPIYITGSCT GQNQEDSDVG DHGEPWVKGL 960 TEGEYSDLSV EERLNALCSL IGVALEGNSM RTVLEERLEA ANSLKKQMLA EAQLDRRRAR 1020 EEYVMQINES LNVGNKPEHK TISSTDARHS PIPNVGEEKS EGPLDTDTGF QQEDCSKSRN 1080 NSYPLNDDFP SEGKLLAQDV PLEADHSQFK QSVLTIEKSR SQLKSYIGHK AEEMYVYRSL 1140 PLGQDRRCNR YWQFTSSASR NEPGNGRIFV ELHNGSWRLI DSAEGFDSLL ASLDIRGIRE 1200 SHLHLMLRKL ENSFKAAVRG KILQDIQSKG EGAAGHDYNA HTYGSVTTLC ADDSDAFDSS 1260 TSFRSEPEET GSRKTETLKR YHDFESWMRS ECFSLSILSA DKYGKKQGRQ LLGICNHCQC 1320 FYSESSNHCR SCHETRRISD LYFSEHESRC KENISISWCS SSPLRIRLLK MLLTVIEASI 1380 PVEAFQPSWT DFQRKTWGSR LLSSSSAEEL LQILTLLENV IKRDVMRSNY ETTYELLACI 1440 NPPGNSICRS SPETVPVLSW IPLTTAAVAL RLLEFDASLS YILQQKAESH DHGSRDIKHL 1500 SNYVAVKNNQ DSETAVISNE YVKESNWIDC GVGLSRTNHR RSDCKGGHGR TRGGKSQKRS 1560 SGSRAVSGKR STGTNRQILR QVLMWKDGQV DETGGSRCGR RSIRNRQKSA SKIKFGSEGG 1620 GHPEETIHEK LELSLDNNQE WNNDQDLEQI DGSPSSSDRL LSIDDNGGVE YDDMLVDVCA 1680 RSRRSGYVLA SRSYDMDEDK EDDLYDDGER GNVMDGGDLY VEQYINGEYN EESNKDLEHN 1740 MVSDEEMQSA SSDYSI

Sequence ? help Back to Top

Protein Sequence Length: 1756 aa Download sequence

MECSCEGEKK PPAGANKIKR KMKTASQLEI LEKAYTVEAY PSEALRAELS VKLGLSDRQL  60
QMWFCYRRLK DRKAPSVKRP RKSSPAMAGA AVANPVGGSG EKIMAGNLGY ESSSGLGMGS  120
NVYAHPVDMR LAGQRPGVAN ARIGVNSPSM KRFYESQQSI AELRAMALIE AQLGEPLRED  180
GPVLGMEFDP LPPGAFGAPI GATTNIDEKK AGQVFEVSAY KQRDVEQIEH HQISGRTLHE  240
YKFLPEQPTV KLDRHERGAS SYQYDSHANV QNMSRTQSIA SGHSFLHGHE QVSSGYFSQG  300
QMPNLNIFSQ QSRRGHLLLS SMGEHDSSLC KSSLVNISMD PEYGTHRTTQ PEYTSILSDQ  360
SVVHGNNVLW IEKKHKNDEA RIAREVEAHE KRMRKELEKQ DALRRKREEQ IRKEMERHDR  420
ERQREEERLS REKQKEEERY LREQRRETLR REKFLRRESI RAERTRQKEA LRREREAARL  480
KAANQRAIAR RMAKESMELA DDERLELMEL AVSSKGLPSI MSLDHETLEN LELFEVMRPT  540
FPPESVKMKM PFLSHPWTDS EVNVGNLLMV WKFLVTFADV LGLWPFTLDE FVQAFHDHDS  600
RLLGEVHVAL LRCIIKDIED VTRSPSAGLG SNQSSAPNPG GGHLYVVEGA YAWGFDICSW  660
QHHLNPLTWP EILRQLALSA GFGPQLVKGG NAEPAYLRDE NEQGNDVAGI ISNLRNGLAA  720
ENAVAIMHER GLSNQRRSRH RLTPGTVKFA AFHVLSLEGS KGLPVVEVAD KIQKSGLRDL  780
TTSRTPEASI AAALSRDSKL FERTAPSTYC VRSPYRRDPG DADAILSTAR ERIHILKSGF  840
LDGEDAERND DSEVDVAEDP EVDDLGIEGN SMKEHQSHEV CPFDEMTSVT SGKGSNEVRD  900
SLEVGMENGG PYTSVLDFEG RVKGEESPIE QPIYITGSCT GQNQEDSDVG DHGEPWVKGL  960
TEGEYSDLSV EERLNALCSL IGVALEGNSM RTVLEERLEA ANSLKKQMLA EAQLDRRRAR  1020
EEYVMQINES LNVGNKPEHK TISSTDARHS PIPNVGEEKS EGPLDTDTGF QQEDCSKSRN  1080
NSYPLNDDFP SEGKLLAQDV PLEADHSQFK QSVLTIEKSR SQLKSYIGHK AEEMYVYRSL  1140
PLGQDRRCNR YWQFTSSASR NEPGNGRIFV ELHNGSWRLI DSAEGFDSLL ASLDIRGIRE  1200
SHLHLMLRKL ENSFKAAVRG KILQDIQSKG EGAAGHDYNA HTYGSVTTLC ADDSDAFDSS  1260
TSFRSEPEET GSRKTETLKR YHDFESWMRS ECFSLSILSA DKYGKKQGRQ LLGICNHCQC  1320
FYSESSNHCR SCHETRRISD LYFSEHESRC KENISISWCS SSPLRIRLLK MLLTVIEASI  1380
PVEAFQPSWT DFQRKTWGSR LLSSSSAEEL LQILTLLENV IKRDVMRSNY ETTYELLACI  1440
NPPGNSICRS SPETVPVLSW IPLTTAAVAL RLLEFDASLS YILQQKAESH DHGSRDIKHL  1500
SNYVAVKNNQ DSETAVISNE YVKESNWIDC GVGLSRTNHR RSDCKGGHGR TRGGKSQKRS  1560
SGSRAVSGKR STGTNRQILR QVLMWKDGQV DETGGSRCGR RSIRNRQKSA SKIKFGSEGG  1620
GHPEETIHEK LELSLDNNQE WNNDQDLEQI DGSPSSSDRL LSIDDNGGVE YDDMLVDVCA  1680
RSRRSGYVLA SRSYDMDEDK EDDLYDDGER GNVMDGGDLY VEQYINGEYN EESNKDLEHN  1740
MVSDEEMQSA SSDYSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein