PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022135829.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

FAR1

Protein Properties

Length: 701aa MW: 81073.2 Da PI: 6.8111

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022135829.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.8	4.2e-24	79	170	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y+++A++ GFs+rk++s++s++ g +++r+fvC+++g+++++kk+++++ r+r++ r+gC+akl ++ke ++w+v+++++ HnHel XP_022135829.1 79 EYYSNFARKNGFSIRKARSTESQNLG-VYRRDFVCYRSGYNQPRKKANVEHPRERKSVRCGCDAKLYLTKEIvdgASQWYVSQFSNVHNHELL 170 69******************8888.**************************************99877789************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 701 aa Download sequence
MKIMFSPEMA MKLTANIWIR RQQCPCGDWK CYVRYEGEDQ ASISSRLVKS ETVAPLLSSE 60 SVFTPYVGQI FKSDDDAFEY YSNFARKNGF SIRKARSTES QNLGVYRRDF VCYRSGYNQP 120 RKKANVEHPR ERKSVRCGCD AKLYLTKEIV DGASQWYVSQ FSNVHNHELL EDDQVRLLPA 180 YRKIQEADQE RILLLSKAGF PVNRIVKVLE IEKGVQPGQL PFIEKDVRNF VRTCKKTVEE 240 NDALLNEKRE NDLLELLEAC KAMAERDPEF VFDYTRDENG KVENISWAYG DPIRAYSVFG 300 DVVSFDTSYR SITYGLLLGV WFGMNNHGKA IILGCILLQE ENSHSFSWAL QTFVQFMRGK 360 HPQTILTDID SGLRDAISRE MPNTKHVVCI WHILSKLSSW FSLPLGLQYA DFKVQFDMLW 420 HLENIADFEH QWDLLVTQFG LASDKHIALL YLYRASWPFS FIRSSFLART LTVDFFQSLE 480 TFLKRIXSAQ TCLQVFFEQI SNTASSRSQA KEGMQYLHIK TCMPIEEHAQ SILTPYAFNV 540 LQNEIVLSMQ YVATEMGNGS YLLQHYKKMD VERFVNWTQD DEQVQCSCKE FEHSGILCRH 600 SIRVLVVKNY FKLPDKYLLL RWQLQNSLGT IDDAHSQGRS EVCAQAFHSL AANLLTESLI 660 SQKRLNYVCR ELSGLLEHVR TMPVVDEFSL NTTVVNNVNE P

Sequence ? help Back to Top

Protein Sequence Length: 701 aa Download sequence

MKIMFSPEMA MKLTANIWIR RQQCPCGDWK CYVRYEGEDQ ASISSRLVKS ETVAPLLSSE  60
SVFTPYVGQI FKSDDDAFEY YSNFARKNGF SIRKARSTES QNLGVYRRDF VCYRSGYNQP  120
RKKANVEHPR ERKSVRCGCD AKLYLTKEIV DGASQWYVSQ FSNVHNHELL EDDQVRLLPA  180
YRKIQEADQE RILLLSKAGF PVNRIVKVLE IEKGVQPGQL PFIEKDVRNF VRTCKKTVEE  240
NDALLNEKRE NDLLELLEAC KAMAERDPEF VFDYTRDENG KVENISWAYG DPIRAYSVFG  300
DVVSFDTSYR SITYGLLLGV WFGMNNHGKA IILGCILLQE ENSHSFSWAL QTFVQFMRGK  360
HPQTILTDID SGLRDAISRE MPNTKHVVCI WHILSKLSSW FSLPLGLQYA DFKVQFDMLW  420
HLENIADFEH QWDLLVTQFG LASDKHIALL YLYRASWPFS FIRSSFLART LTVDFFQSLE  480
TFLKRIXSAQ TCLQVFFEQI SNTASSRSQA KEGMQYLHIK TCMPIEEHAQ SILTPYAFNV  540
LQNEIVLSMQ YVATEMGNGS YLLQHYKKMD VERFVNWTQD DEQVQCSCKE FEHSGILCRH  600
SIRVLVVKNY FKLPDKYLLL RWQLQNSLGT IDDAHSQGRS EVCAQAFHSL AANLLTESLI  660
SQKRLNYVCR ELSGLLEHVR TMPVVDEFSL NTTVVNNVNE P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein