PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022135830.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

FAR1

Protein Properties

Length: 661aa MW: 76479.2 Da PI: 7.2118

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022135830.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	38.6	3.7e-12	79	136	1	59
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetr 59 ++Y+++A++ GFs+rk++s++s++ g +++r+fvC+++g+++++kk+++++ r+r++ r XP_022135830.1 79 EYYSNFARKNGFSIRKARSTESQNLG-VYRRDFVCYRSGYNQPRKKANVEHPRERKSVR 136 69******************8888.******************999999998876 PP

Sequence ? help Back to Top
Protein Sequence Length: 661 aa Download sequence
MKIMFSPEMA MKLTANIWIR RQQCPCGDWK CYVRYEGEDQ ASISSRLVKS ETVAPLLSSE 60 SVFTPYVGQI FKSDDDAFEY YSNFARKNGF SIRKARSTES QNLGVYRRDF VCYRSGYNQP 120 RKKANVEHPR ERKSVRLLPA YRKIQEADQE RILLLSKAGF PVNRIVKVLE IEKGVQPGQL 180 PFIEKDVRNF VRTCKKTVEE NDALLNEKRE NDLLELLEAC KAMAERDPEF VFDYTRDENG 240 KVENISWAYG DPIRAYSVFG DVVSFDTSYR SITYGLLLGV WFGMNNHGKA IILGCILLQE 300 ENSHSFSWAL QTFVQFMRGK HPQTILTDID SGLRDAISRE MPNTKHVVCI WHILSKLSSW 360 FSLPLGLQYA DFKVQFDMLW HLENIADFEH QWDLLVTQFG LASDKHIALL YLYRASWPFS 420 FIRSSFLART LTVDFFQSLE TFLKRIXSAQ TCLQVFFEQI SNTASSRSQA KEGMQYLHIK 480 TCMPIEEHAQ SILTPYAFNV LQNEIVLSMQ YVATEMGNGS YLLQHYKKMD VERFVNWTQD 540 DEQVQCSCKE FEHSGILCRH SIRVLVVKNY FKLPDKYLLL RWQLQNSLGT IDDAHSQGRS 600 EVCAQAFHSL AANLLTESLI SQKRLNYVCR ELSGLLEHVR TMPVVDEFSL NTTVVNNVNE 660 P

Sequence ? help Back to Top

Protein Sequence Length: 661 aa Download sequence

MKIMFSPEMA MKLTANIWIR RQQCPCGDWK CYVRYEGEDQ ASISSRLVKS ETVAPLLSSE  60
SVFTPYVGQI FKSDDDAFEY YSNFARKNGF SIRKARSTES QNLGVYRRDF VCYRSGYNQP  120
RKKANVEHPR ERKSVRLLPA YRKIQEADQE RILLLSKAGF PVNRIVKVLE IEKGVQPGQL  180
PFIEKDVRNF VRTCKKTVEE NDALLNEKRE NDLLELLEAC KAMAERDPEF VFDYTRDENG  240
KVENISWAYG DPIRAYSVFG DVVSFDTSYR SITYGLLLGV WFGMNNHGKA IILGCILLQE  300
ENSHSFSWAL QTFVQFMRGK HPQTILTDID SGLRDAISRE MPNTKHVVCI WHILSKLSSW  360
FSLPLGLQYA DFKVQFDMLW HLENIADFEH QWDLLVTQFG LASDKHIALL YLYRASWPFS  420
FIRSSFLART LTVDFFQSLE TFLKRIXSAQ TCLQVFFEQI SNTASSRSQA KEGMQYLHIK  480
TCMPIEEHAQ SILTPYAFNV LQNEIVLSMQ YVATEMGNGS YLLQHYKKMD VERFVNWTQD  540
DEQVQCSCKE FEHSGILCRH SIRVLVVKNY FKLPDKYLLL RWQLQNSLGT IDDAHSQGRS  600
EVCAQAFHSL AANLLTESLI SQKRLNYVCR ELSGLLEHVR TMPVVDEFSL NTTVVNNVNE  660
P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein