PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022136067.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB_related
Protein Properties Length: 76aa    MW: 8802.94 Da    PI: 6.2466
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022136067.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.14e-081057247
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                     g+WT+   + + +a + +  +   +W  +a+ +g  +t++++k ++q +
   XP_022136067.1 10 GSWTAMQNKAFERALAVYDEDtpqRWLNVAKAIG-EKTEEEVKRHYQLL 57
                     89********************************.9**********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 76 aa     Download sequence    
MASMSAHGSG SWTAMQNKAF ERALAVYDED TPQRWLNVAK AIGEKTEEEV KRHYQLLVED  60
VKHIEFGEVS FPYRRM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.11e-29MYB_related family protein