PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022136072.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB_related
Protein Properties Length: 85aa    MW: 9519.47 Da    PI: 4.8004
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022136072.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.62.9e-081158247
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                     g+W++   + + +a + +  +   +W  +a+ +g g+t++++k ++q +
   XP_022136072.1 11 GAWSAMQNKAFERALAVYDEDtpqRWLNVANAIG-GKTEEEVKRHYQLL 58
                     79********************************.***********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 85 aa     Download sequence    
MASMSAHGSD GAWSAMQNKA FERALAVYDE DTPQRWLNVA NAIGGKTEEE VKRHYQLLVE  60
DVKHIESGEV PFPYRSSGGC YDNDR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.14e-35MYB_related family protein