PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022136206.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

GeBP

Protein Properties

Length: 391aa MW: 44043.2 Da PI: 5.0901

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022136206.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	123.9	7.5e-39	170	264	3	97
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 ++rlwse+Dei++LqG+id+++ +g++p++d++ f e +kk++s++vsk+ql++K+rrLKkK+k++ +k ++g++p++ k+h+qk+f lskkiWg XP_022136206.1 170 INRLWSEDDEISILQGMIDYQSAKGSDPYSDMSLFLESIKKNLSVDVSKNQLIDKVRRLKKKYKNNLEKGRNGDDPVLLKPHEQKSFVLSKKIWG 264 68********************************************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MAPKRLVEDL PSAARFSDAE EEESDFETLE EDPEIDNVTP NSEDENEEDT PEEEEEEEQQ 60 PIPSPIFSKQ ENSFDKDSGF VSDSDSEKTQ SSPSASAFTI KPILRKSPCG SSKPRKSSHK 120 SNLDSATVAP SSGSKRPIES KFHGTESNNK KKKVMHGEDE EGKKVSGSGI NRLWSEDDEI 180 SILQGMIDYQ SAKGSDPYSD MSLFLESIKK NLSVDVSKNQ LIDKVRRLKK KYKNNLEKGR 240 NGDDPVLLKP HEQKSFVLSK KIWGNEAKKK PRKQSVKASN SVSISSPRVD VEAAKKDQTV 300 NVESKILPEE FLSDYPWLKA SFQMENDKFC SEGLMRLVKE RMPSIGSEKA KELDDKWRKL 360 GEGELELYLK KVELVREQCK LILDSMGKAR S

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MAPKRLVEDL PSAARFSDAE EEESDFETLE EDPEIDNVTP NSEDENEEDT PEEEEEEEQQ  60
PIPSPIFSKQ ENSFDKDSGF VSDSDSEKTQ SSPSASAFTI KPILRKSPCG SSKPRKSSHK  120
SNLDSATVAP SSGSKRPIES KFHGTESNNK KKKVMHGEDE EGKKVSGSGI NRLWSEDDEI  180
SILQGMIDYQ SAKGSDPYSD MSLFLESIKK NLSVDVSKNQ LIDKVRRLKK KYKNNLEKGR  240
NGDDPVLLKP HEQKSFVLSK KIWGNEAKKK PRKQSVKASN SVSISSPRVD VEAAKKDQTV  300
NVESKILPEE FLSDYPWLKA SFQMENDKFC SEGLMRLVKE RMPSIGSEKA KELDDKWRKL  360
GEGELELYLK KVELVREQCK LILDSMGKAR S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61730.1	1e-29	GeBP family protein