PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022136237.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family BBR-BPC
Protein Properties Length: 313aa    MW: 35013.7 Da    PI: 10.1508
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022136237.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind366.93.7e-11213131301
       GAGA_bind   1 mdddgsre..rnkg.yye..............pa.aslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalver 77 
                     mdd  ++e  r+k  y++              ++ ++l   +++++ms+iaerda+irernlalsek++a+a+rd+a+ qrd+ala+r+ al+er
  XP_022136237.1   1 MDDGRQHEngRHKLdYFRgspspwnmvpqhhvKEpNALV--MNKKIMSIIAERDAAIRERNLALSEKNDALAARDEALRQRDEALAQRDTALMER 93 
                     666655555788877888999999999766653335666..99**************************************************** PP

       GAGA_bind  78 dnkllalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkk.ks 171
                     dn+l+al+ ++n+  s+ p g ++ ++tk +++l + + p+++++++++++ ++++a+pi+  a+ea ++++ k+++ +k+  +k+++ ++k  +
  XP_022136237.1  94 DNALAALQIRDNA--SNFPLGGGIQQKTKRLHHLSN-HMPNMAETPYGAKDVQITDAFPITVIASEAVKSQQGKRTKDNKVVSSKTSRPPRKkVG 185
                     *********9998..7789999**********9998.78****************************9999999888888888887775544045 PP

       GAGA_bind 172 ekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafk 266
                     e+ +++ ++++  ++ +++++ +d++ln vs+D+s++P+P+CsCtG +rqCYkWGnGGWqS+CCtt +S+yPLP ++++r+aR++grKmS+++f+
  XP_022136237.1 186 EDLNRQAATDG--TKYRTDWDGQDVGLNLVSFDDSSMPAPICSCTGLPRQCYKWGNGGWQSSCCTTHMSMYPLPHMPNKRHARMGGRKMSGSVFT 278
                     56666666666..68******************************************************************************** PP

       GAGA_bind 267 klLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     klL++Laa G+dls pvDLkdhWA+HGtn+++tir
  XP_022136237.1 279 KLLSRLAAGGHDLSIPVDLKDHWARHGTNRYITIR 313
                     **********************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MDDGRQHENG RHKLDYFRGS PSPWNMVPQH HVKEPNALVM NKKIMSIIAE RDAAIRERNL  60
ALSEKNDALA ARDEALRQRD EALAQRDTAL MERDNALAAL QIRDNASNFP LGGGIQQKTK  120
RLHHLSNHMP NMAETPYGAK DVQITDAFPI TVIASEAVKS QQGKRTKDNK VVSSKTSRPP  180
RKKVGEDLNR QAATDGTKYR TDWDGQDVGL NLVSFDDSSM PAPICSCTGL PRQCYKWGNG  240
GWQSSCCTTH MSMYPLPHMP NKRHARMGGR KMSGSVFTKL LSRLAAGGHD LSIPVDLKDH  300
WARHGTNRYI TIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21240.11e-135BBR-BPC family protein