PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022136635.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

CAMTA

Protein Properties

Length: 1099aa MW: 123887 Da PI: 6.5348

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022136635.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	175.2	8.7e-55	20	136	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 l+ ++rwl++ ei++iL+n+ek+++++e+++ p+sgsl+Ly+rk++ryfrkDG++w+kkkdgk+v+E+he+LK g+v +l+cyYah+een++fqr XP_022136635.1 20 LEAQHRWLRPAEICEILNNYEKFSIASEPANMPPSGSLFLYDRKVLRYFRKDGHNWRKKKDGKAVKEAHERLKAGSVYALHCYYAHGEENENFQR 114 5679***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+ywlLee+l++ivlvhy+ev+ XP_022136635.1 115 RTYWLLEEDLSHIVLVHYREVQ 136 *****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1099 aa Download sequence
MAENRCCIPA NPIGIEQILL EAQHRWLRPA EICEILNNYE KFSIASEPAN MPPSGSLFLY 60 DRKVLRYFRK DGHNWRKKKD GKAVKEAHER LKAGSVYALH CYYAHGEENE NFQRRTYWLL 120 EEDLSHIVLV HYREVQSSRA NLNRNRGTHE AVLVSREFEE TTSHSEMDAS NSSSFHPSNY 180 QIPSQTTEIS LNSAQVSEYE DVESEYSSQA STVFHSFLGL QRPRMERFGA DLCDPNYPIS 240 LSDNYQENFS VFSGNGFPTT SDRSKDNNSA GLNCVPQKNL NFSSENVLES GSTGIYSSNL 300 EPSLSASQPE ISGDVPKQGD EVLRMLFTEK CKRKEFNNHL HSQEDCQTSQ RNSSPLVRWP 360 IDQQTLQADL VCNVASKFHQ LDHVNVVNSM QSSQMNTGPQ NDQSMQEHLQ QMLPNTKHEY 420 YLNSISDGKV ILEGKANFPK KQPLLDAITS EGLKKSDSFN QWMNRELGDV NEASMQSNSG 480 AYWNSVENEV GHSSISSQVH PDAYMFSPSL SHEQLFSIID FSPSWAYEGS EIKVLLSGRF 540 LTSHQEVENS KWSCMFGEVE VPAEIIANGV LRCFTPIHKA GRVPFYVTCS NRLACSEVRE 600 FEYRVKCIQN FVVMDDHSSN TFEALALRFV KLLCLSCPST LIADPNSSDG SSNSNKISEL 660 LKEDKSEWGQ LINPKWDDNF SFESAKELLL QNLLKEKLHV WLLQKVREGG KGPSVLDEHG 720 QGVLHFAAAL NYDWALLPSI VAGINVNFRD ANGWTALHWA AFFGRERVVA ALISMGAAPG 780 LLTDPSPKHP SGRTPADLAS LNGHKGIAGY LAESDLSARL ESLAFDSQES KSAETCGARA 840 VQTATERVAT PHDGNDIHTL SLKDSLAAVS NATQAAARIH EVMRVQSFQR KQLELKYRDD 900 RLDMLHDQAL SVLAVKRGIP GPHDKHAAAI RIQNKFRSWK NRKDFLIIRQ RIVKIQAHVR 960 GHQVRKNYRT IVWSVGILEK LILRWRRKGS GLRGFKPEAP AESSKKITLV AEDDDDFLKQ 1020 GRKQTEERLQ KALARVKSMV QYPEARDQYR RLLNVVSEMQ EIKVVKNGAL DNVDETADFD 1080 DLIDIETLLG EDNFMPTAI

Sequence ? help Back to Top

Protein Sequence Length: 1099 aa Download sequence

MAENRCCIPA NPIGIEQILL EAQHRWLRPA EICEILNNYE KFSIASEPAN MPPSGSLFLY  60
DRKVLRYFRK DGHNWRKKKD GKAVKEAHER LKAGSVYALH CYYAHGEENE NFQRRTYWLL  120
EEDLSHIVLV HYREVQSSRA NLNRNRGTHE AVLVSREFEE TTSHSEMDAS NSSSFHPSNY  180
QIPSQTTEIS LNSAQVSEYE DVESEYSSQA STVFHSFLGL QRPRMERFGA DLCDPNYPIS  240
LSDNYQENFS VFSGNGFPTT SDRSKDNNSA GLNCVPQKNL NFSSENVLES GSTGIYSSNL  300
EPSLSASQPE ISGDVPKQGD EVLRMLFTEK CKRKEFNNHL HSQEDCQTSQ RNSSPLVRWP  360
IDQQTLQADL VCNVASKFHQ LDHVNVVNSM QSSQMNTGPQ NDQSMQEHLQ QMLPNTKHEY  420
YLNSISDGKV ILEGKANFPK KQPLLDAITS EGLKKSDSFN QWMNRELGDV NEASMQSNSG  480
AYWNSVENEV GHSSISSQVH PDAYMFSPSL SHEQLFSIID FSPSWAYEGS EIKVLLSGRF  540
LTSHQEVENS KWSCMFGEVE VPAEIIANGV LRCFTPIHKA GRVPFYVTCS NRLACSEVRE  600
FEYRVKCIQN FVVMDDHSSN TFEALALRFV KLLCLSCPST LIADPNSSDG SSNSNKISEL  660
LKEDKSEWGQ LINPKWDDNF SFESAKELLL QNLLKEKLHV WLLQKVREGG KGPSVLDEHG  720
QGVLHFAAAL NYDWALLPSI VAGINVNFRD ANGWTALHWA AFFGRERVVA ALISMGAAPG  780
LLTDPSPKHP SGRTPADLAS LNGHKGIAGY LAESDLSARL ESLAFDSQES KSAETCGARA  840
VQTATERVAT PHDGNDIHTL SLKDSLAAVS NATQAAARIH EVMRVQSFQR KQLELKYRDD  900
RLDMLHDQAL SVLAVKRGIP GPHDKHAAAI RIQNKFRSWK NRKDFLIIRQ RIVKIQAHVR  960
GHQVRKNYRT IVWSVGILEK LILRWRRKGS GLRGFKPEAP AESSKKITLV AEDDDDFLKQ  1020
GRKQTEERLQ KALARVKSMV QYPEARDQYR RLLNVVSEMQ EIKVVKNGAL DNVDETADFD  1080
DLIDIETLLG EDNFMPTAI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein