PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022136661.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family WRKY
Protein Properties Length: 188aa    MW: 20837.6 Da    PI: 8.337
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022136661.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1023.5e-32109167159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK vk s++prsYYrCt+++C+vkk+++r ++dp++v++tYeg Hnh+
  XP_022136661.1 109 LDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHP 167
                     59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MVMDGDNISQ LLSAPTNGDI THTQLLPLSQ SCDEIDWEGL LCGSSLSLEM EKASGSEGIK  60
MGDFDGGAGR RDEGNNGGKN KGKMMMGKRS SSAVVPRIAF QTRSAEDVLD DGYRWRKYGQ  120
KAVKHSTHPR SYYRCTHHTC NVKKQIQRHS KDPTIVVTTY EGIHNHPSEK LMETLSPLLK  180
QLQFLSGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41570.13e-57WRKY family protein