PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022136666.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MIKC_MADS
Protein Properties Length: 336aa    MW: 37502.8 Da    PI: 4.8539
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022136666.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF87.95.3e-281059150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    krien++nrqvtfskRrng++KKA+ELS+LCd+++a+i+fs++g+l  +s
  XP_022136666.1 10 KRIENNTNRQVTFSKRRNGLIKKAYELSILCDIDIALIMFSPSGRLSHFS 59
                    79********************************************9997 PP
2K-box16.43.9e-07111180877
           K-box   8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqi 77 
                       ++++ e+lqqe+  ++ e++  ++++R +  + L+  s  e+++ e++L + l +i ++K++ll +++
  XP_022136666.1 111 TSSNSNVEELQQEIGTMRHELQLAEQQLRLFEPDPLSFASNGEIESCEKNLLDTLARITQRKKDLLSSHL 180
                     368899***********************************************************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MMGRVKLQIK RIENNTNRQV TFSKRRNGLI KKAYELSILC DIDIALIMFS PSGRLSHFSG  60
RRRIEDVLAR FINLPDHERG GSVVHNKEFL LGTLNNLKTE NDIALQLANP TSSNSNVEEL  120
QQEIGTMRHE LQLAEQQLRL FEPDPLSFAS NGEIESCEKN LLDTLARITQ RKKDLLSSHL  180
SPYDPPNHIQ MYLDSQEGIP TSFENDVANW LPENGQSSTQ LCGPSESSSI PQSGQYPTTV  240
YDQVSQASNM CNMGGCDMGN PNEDAYSSWH HSYTTSQLLS SFIPQTSFDD SIKHEIGGGC  300
MMSQQQVDTI SNGNQMPPSD GSTNYDATKI PQLNVD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22130.12e-91MIKC_MADS family protein