PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022136670.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family ZF-HD
Protein Properties Length: 210aa    MW: 23908.4 Da    PI: 8.3937
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022136670.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer101.84.8e-3253103556
     ZF-HD_dimer   5 rYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRre 56 
                     +Y+eClkNhA++lGgha+DGCgEfmp+ g +g+ +alkCaAC CHRnFHR++
  XP_022136670.1  53 TYRECLKNHAVALGGHALDGCGEFMPA-GPDGSLDALKCAACTCHRNFHRKD 103
                     7*************************9.999*******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MELEDHEERM QQVDLDLDLE AVITTKPLLR NHNPPHAPRL NKNPTPVQTN LPTYRECLKN  60
HAVALGGHAL DGCGEFMPAG PDGSLDALKC AACTCHRNFH RKDAPLISYS RAPAGYLHVA  120
PERRMLALPA PAEMGRKRMR TKFTEEQKEK MLGMAEKLEW RIEKEDEAAV AEFCNAIGVK  180
RRVLKVWMHN NKNTFRKDQH DHTKFSSPIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.11e-57ZF-HD family protein