PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022136742.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

NF-YB

Protein Properties

Length: 219aa MW: 23923.5 Da PI: 6.9488

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022136742.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	180.6	1.3e-56	30	125	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 +eqdrflPianvsrimkk lPanakisk+aketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yv+plk+yl+kyre+e+e XP_022136742.1 30 KEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVAPLKIYLNKYRETEEE 124 89*******************************************************************************************98 PP NF-YB 97 k 97 k XP_022136742.1 125 K 125 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MSGHKRNSTA AAVSPVGSPT SGDISDSSTK EQDRFLPIAN VSRIMKKSLP ANAKISKEAK 60 ETVQECVSEF ISFITGEASD KCQREKRKTI NGDDLLWAMT TLGFENYVAP LKIYLNKYRE 120 TEEEKHSFAR QDDQAPPPGS AEQIIGGKSA SSVMDFQNFN SGFYSLGNQN QTAQKSFNII 180 DGVGFGENFR GFNVSGVHEN GEGNRGRAMA AHLQQSSGW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14540.1	8e-65	NF-YB family protein