PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022136752.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 231aa MW: 26175 Da PI: 9.2072

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022136752.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.4	4.5e-12	63	108	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h +Er+RR+++ ++f L llP + kK++Ka++L A++YIk+ XP_022136752.1 63 DHVLAERKRREKLSQRFIALSALLPGL-----KKMDKASVLGDAIKYIKQV 108 58899********************.....9**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MNNNNTCDSR AFVAASEEPT FSRPTAEIIC SSHGMHTSFS PPSINNNIPE KRKPTPTTAH 60 AQDHVLAERK RREKLSQRFI ALSALLPGLK KMDKASVLGD AIKYIKQVEE RVRVLEEKAK 120 KRSIESAILV NKSHLYNDCD EEISRFSDQK QLPEIEARIS DDKNNVLVRI HCEKNEGLFA 180 KLLGEMEKMN LTIVNANFFP FGTSTQYMVL VAQGTNKLVD IKFGIWHKIH V

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	51	72	KRKPTPTTAHAQDHVLAERKRR
2	68	73	ERKRRE
3	69	74	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	2e-47	bHLH family protein