PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022136847.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NF-YC
Protein Properties Length: 123aa    MW: 13801.2 Da    PI: 7.6105
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022136847.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC101.94.4e-3218981998
           NF-YC 19 helPlarikkilk.adedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98
                    h+lPlarikki+k + edvkmis eaP+++skacelfi elt rsw+ a ++k+r l+k d+a+a+  td fdfl+  + +
  XP_022136847.1 18 HSLPLARIKKIMKkSGEDVKMISGEAPIVFSKACELFIEELTRRSWMVAMQSKKRMLHKEDVASAILATDLFDFLIGLIFH 98
                    99**********73579**********************************************************987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    
MRQAGAYSGV LYWKTGPHSL PLARIKKIMK KSGEDVKMIS GEAPIVFSKA CELFIEELTR  60
RSWMVAMQSK KRMLHKEDVA SAILATDLFD FLIGLIFHES AGEIADETTV SMPMEMSFRD  120
LSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48590.11e-32NF-YC family protein