PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022136944.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GRAS
Protein Properties Length: 613aa    MW: 67321.4 Da    PI: 5.1002
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022136944.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS356.34.5e-1092406112373
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      ++Ll+cA+ +s+++  +a ++L r+s+   +dgdp++Rla+yf eAL++rl+   +   + l +se+ + ns++ l ++k++++++P+ kf+hl
  XP_022136944.1 240 LKVLLDCAR-LSDSEPDRAVKTLDRISKSLREDGDPIERLAFYFEEALRSRLSP--TARKNRLDSSES-DANSEDFLLSYKALNDACPYSKFAHL 330
                     679*****9.6777999************************************9..444444555555.47899********************* PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     taNqaIlea+e+++++Hi+Df+i qG+QW+aLlqaLa+R++g+p ++Ri g+ +p+ g   + +l +tg+rL++fA+ l+++fef++ + + +e+
  XP_022136944.1 331 TANQAILEATERASKIHIVDFGIVQGVQWAALLQALATRAAGKPtRVRISGIPAPSLGdsPAASLYATGNRLSEFAKLLELNFEFEP-ILTPIEE 424
                     ****************************************77666**********99998999************************.799**** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     l+ +++ ++++E+l Vn++lql++llde  +  +   + L+l kslsPk+v++ e ea++n+  F +rf +al++ysa+f+sl+ +lpr+s er 
  XP_022136944.1 425 LNKSSFIIQSDEVLTVNFMLQLYNLLDEVPTGVH---NALRLAKSLSPKIVTLGEYEASLNRIGFYNRFKNALKFYSAIFESLDPNLPRDSPERL 516
                     **************************77666666...9********************************************************* PP

            GRAS 284 kvErellgreivnvvace...gaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkdrpLvsvSaW 373
                      +E+ llgr+i  vv +e   g++rr r+e +e+W++ +e++GF++v+ls++a +qak ll +++ s  y++ e+  +++ l W+d pL++vS+W
  XP_022136944.1 517 QLEKLLLGRRIAGVVGTEeesGSKRRVRMEDKEQWKNLMESSGFESVALSHYAISQAKILLWNYNySSLYTLIESAPEFLsLAWNDVPLLTVSSW 611
                     ***************988223456*****************************************9999*****9999999************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 613 aa     Download sequence    
MAYMCADSGN LMAIAQQVIK QKQQQEQQQH HQHQHNRHQQ QQHPFSLLPW TSNPSPSMAS  60
SSSAPNLTFG ISGSAFSDPF QVAGPPDSAD PAFHFPNLDH PSAGFRFFPN FGGGGEFDSD  120
DWVDSLVGGG DSTDSSNLPS ACDAFGVYGA DPFNGSPSRL SVACSPPSEF NRVVLPDSSY  180
KTSSVPQPQR PAWSSPPPPS SPPAVKDVGV VKPPAEWLQK NDAVEGSSSA AETESPPPLL  240
KVLLDCARLS DSEPDRAVKT LDRISKSLRE DGDPIERLAF YFEEALRSRL SPTARKNRLD  300
SSESDANSED FLLSYKALND ACPYSKFAHL TANQAILEAT ERASKIHIVD FGIVQGVQWA  360
ALLQALATRA AGKPTRVRIS GIPAPSLGDS PAASLYATGN RLSEFAKLLE LNFEFEPILT  420
PIEELNKSSF IIQSDEVLTV NFMLQLYNLL DEVPTGVHNA LRLAKSLSPK IVTLGEYEAS  480
LNRIGFYNRF KNALKFYSAI FESLDPNLPR DSPERLQLEK LLLGRRIAGV VGTEEESGSK  540
RRVRMEDKEQ WKNLMESSGF ESVALSHYAI SQAKILLWNY NYSSLYTLIE SAPEFLSLAW  600
NDVPLLTVSS WHC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.10.0GRAS family protein