PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022136988.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HD-ZIP
Protein Properties Length: 709aa    MW: 78741.2 Da    PI: 7.0506
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022136988.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.62.9e-202479156
                    TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    +++ +++t++q+++Le++F+++++p++++r +L+++lgL  rq+k+WFqNrR+++k
  XP_022136988.1 24 KKRYHRHTANQIQRLEAMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMK 79
                    688999***********************************************998 PP
2START171.36.3e-542224472206
                     HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     +a  a+ el+++ + +ep+W+ks+    + ++ + + q f++s++      +++ea+r+sg+v+m++a lv  l+d+  +W+e ++     a t+
  XP_022136988.1 222 VATNAMGELLRLSQTNEPFWMKSPsdarDVLDLESYQQAFPRSNTqlknlhSRTEASRDSGMVIMNSASLVDMLMDST-KWTELFPtivsIARTI 315
                     7788999*****************9999999999********999*********************************.*******999999*** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     evis+g      g lqlm++el +lsplv+ R f+++R+++q ++g+w++vdvS + +++++  s    ++++pSg+li++++ng+skvtw+ehv
  XP_022136988.1 316 EVISTGmlgshsGSLQLMYQELHLLSPLVStRQFYVLRHCQQIEQGTWAVVDVSYNIPRENQIVSRDSQCHRFPSGCLIQDMPNGYSKVTWIEHV 410
                     *************************************************************997777889************************* PP

                     E--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlp.hwllrslvksglaegaktwvatlqrqcek 206
                     + +++   hwl+r ++++gla+ a +w+atlqr ce+
  XP_022136988.1 411 EIEDKGStHWLFRDIIHNGLAFCAERWLATLQRMCER 447
                     **999888***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 709 aa     Download sequence    
MDYGSGGGGS GWDNDSSSDP QRKKKRYHRH TANQIQRLEA MFKECPHPDE KQRLQLSREL  60
GLAPRQIKFW FQNRRTQMKA QHERADNSAL RTENDKIRCE NIAIREALKN VICPSCGGPP  120
IQDPYFDEQK LRIENAHLKE ELDRVSSIAA KYIGRPISQL PPIQPSHFSS LELSMGSFAS  180
QEMGSLSLDL DLLPASSSSV PSLPYHHPIH FSDVDKSLMT EVATNAMGEL LRLSQTNEPF  240
WMKSPSDARD VLDLESYQQA FPRSNTQLKN LHSRTEASRD SGMVIMNSAS LVDMLMDSTK  300
WTELFPTIVS IARTIEVIST GMLGSHSGSL QLMYQELHLL SPLVSTRQFY VLRHCQQIEQ  360
GTWAVVDVSY NIPRENQIVS RDSQCHRFPS GCLIQDMPNG YSKVTWIEHV EIEDKGSTHW  420
LFRDIIHNGL AFCAERWLAT LQRMCERFAC LMVAGSSSRD LGGVITSLEG KKSMMKLAQR  480
MVNNFCASIS TSHGHRWTTL SGMNEVGVRV TVHKSMDPGQ SNGVVLSAAT TIWLPVSPQT  540
IFNFFKNDRT RSQWDVLSDG NPVQEVAHIA NGSHPGNCIS VLRAFNTSQN NMLILQESCI  600
DSSGSLVVYC PVDLPAMNVA MSGEDPSSIP LLPSGFTILP DGRRDPGEGA SSSSDVHSRS  660
RGSLVTVAFQ ILVSSLPSGK LNLESVTTVN NLISTTVHQI KTALNCHSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein