PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022137058.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB
Protein Properties Length: 301aa    MW: 33747 Da    PI: 8.564
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022137058.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.61.3e-171562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +lv +++++G+g+W++++   g+ R+ k+c++rw +yl
   XP_022137058.1 15 KGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYL 62
                     79******************************99************97 PP
2Myb_DNA-binding48.61.9e-1568113148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T  E++ ++++ ++lG++ W++Ia++++  Rt++++k++w+++l
   XP_022137058.1  68 RGNFTDHEEKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 113
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MMGRPPCCDK VGVKKGPWTP EEDIILVSYI QEHGPGNWRS VPTNTGLLRC SKSCRLRWTN  60
YLRPGIKRGN FTDHEEKMII HLQALLGNRW AAIASYLPQR TDNDIKNYWN THLKKKLKKL  120
QSEGGQDRCT ASSLTKSKGQ WERRLQTDIH TAKRALCEAL SLDKTTSYYD IMGESKTPTN  180
SNLQTPITTA TYASSAENIA RLLENWMKKS PKSSQTTTTQ LSVTASEGSH SATNTTSPEP  240
NLDYHSSFIS FNNTNYSSST PNQVPLTLLE KWLFDDAALA HVPDHDLISV SLEPETEGGL  300
F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47600.11e-111MYB family protein