PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022137118.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family B3
Protein Properties Length: 219aa    MW: 25031.1 Da    PI: 5.5889
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022137118.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.35.8e-1822107899
                     -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                     s++l s rl lp kf+++ +++ ++   ++l  +sg++W v l   ++ +  ++ +GW  F++++ L+ gDf+vF++dg+  f  +v+vf++
  XP_022137118.1  22 SSSLCSERLKLPLKFVRHLEEIIAR--SVVLIGPSGQTWLVDL--IQQNDNLFFCDGWPTFARDHALECGDFLVFRHDGDLHF--TVQVFDQ 107
                     6788899*********888777555..6***************..77777799999********************8886666..9*99997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
METESRQEMV TARRPCFYIF YSSSLCSERL KLPLKFVRHL EEIIARSVVL IGPSGQTWLV  60
DLIQQNDNLF FCDGWPTFAR DHALECGDFL VFRHDGDLHF TVQVFDQSAC EKEGAFYSEC  120
SQDNTGHKRD REEDHTPSDK CAEAVAKKMR SIFDVHSECR ENLAVMKTVE VHKNGAGQNG  180
ISKVDDVTTQ DKILALSLSS QDEKKVSQSF TSNYPYFVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34400.11e-16B3 family protein