PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022137149.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

C2H2

Protein Properties

Length: 1561aa MW: 174556 Da PI: 8.6691

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022137149.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.9	0.00033	1470	1492	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 Cp Cgk F ++ +L++H r+H XP_022137149.1 1470 CPvkGCGKKFFSHKYLVQHRRVH 1492 9999*****************99 PP
2	zf-C2H2	11.8	0.00077	1528	1554	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C Cg++F+ s++ rH r+ H XP_022137149.1 1528 YVCAepGCGQTFRFVSDFSRHKRKtgH 1554 899999****************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1561 aa Download sequence
MAASALAAEP TQEVLSWLKT LPLAPEYHPT LAEFQDPISY IFKIEKEASK FGICKIVPPV 60 PPSPKKTAIV NLNRSLAARA ACSDSSNSKS PPTFTTRQQQ IGFCPRKTRP VQKSVWQSGE 120 YYTFQQFEAK AKSFEKSYLK KCGKKGGLSP LEIETLYWRA TLDKPFSVEY ANDMPGSAFV 180 PVSAKMFREA GEGTMLGETA WNMRGVSRAK GSLLRFMKEE IPGVTSPMVY VAMMFSWFAW 240 HVEDHDLHSL NYMHMGAGKT WYGVPRDAAV AFEEVVRVQG YGGEINPLVT FAVLGEKTTV 300 MSPEVLVSAG VPCCRLVQNA GEFVVTFPRA YHTGFSHGFN CGEAANIATP EWLRVAKDAA 360 IRRASINYPP MVSHFQLLYD LALSSRTPLW IGAAPRSSRL KDKKKSEGET VIKELFVQNI 420 AENNSLLHIL GRGASVVLLP QGSSDSIYSK LRVGSHLRAK PRFPAGFCSS KEATKSPQSF 480 DYDNLTLENS QGINRVKGFY SANGPYATLS ERSTDNLCAS SSRTLNANNK RGGSANCDGL 540 SDQRLFSCVT CGILSFACVA IIQPREQAAR YLMSADCSFF NDWVAGSGIT SEGIAIRDGH 600 AVTSQQISNS GKREKCVSDG LYDVPVHAVN RQLPVADQSY EANSNTENRK ETSALGMLAL 660 TYGHSSDSEE DNADADAVLN ADDTKLMICS SEDGYQFENS GLTSNEYCKN SATLDHNPSS 720 FSVNTADQMD FQVDDYEEFG RARFDSKDSF NCSSDEIDGI GSTKKNGLST RYQDSHVNNK 780 SPSDGDIEKP MFDKTTEPVE IENIPFAPDI DEDSSRLHVF CLEHAKEVEQ QLRPIGGVHI 840 LLLCHPDYPK MEAEAKLVAE ELRMDHPWTD TMFRGATQDE EKRIQLALDS EDAIPGNGDW 900 AVKLGINLFY SANLSHSPLY SKQMPYNSVI YNAFGRSTSA NSSGKPKVYQ RRTGKLKRVV 960 AGKWCGKVWM SNQVHPLLAK RDPQEEDEDV IFHSWTMSDE KVDRKPENIQ KNETVMVNRK 1020 SAGKRKMASG SRTTKRAKPI ETEDMVSDDS VEDCIHQHHS ILRNNRSKFV ESNDAMSDDS 1080 VEDDSCKKRG RVATSKGGAY CGTDDTGSDD SLGYRSNQRR LGFCGAKLPK WGEIEPVVSD 1140 DSFEHDSSQH QRKKSKSKME KHFERQDALS DECLESGSLK QCSRIPRGKQ AKVFKNVISH 1200 DIRDDSFLWH HQRTSRSKKA KSIESEDAAS EGSLDNNSHQ HRSMPRSKPD KCVVREDAFS 1260 DDPEEDDSSI LQHWKIKRNM PSKYIERENT SDDQLDNGAN QGRRRMLRSK PVKTETIPQM 1320 KQEISRPAKR GASQTLKEEF SQSLKRGARH MLKLETPQPI KPHATNLRGK QAKRNSKFTD 1380 VESEEEQPGG PSTRLRKRTP KPTKLSEAKV KDKKQIGKKK VKNASSLKTP AGHRDSKARD 1440 EESEYLCDIE GCNMSFGSKQ ELVLHKRNIC PVKGCGKKFF SHKYLVQHRR VHMDDRPLKC 1500 PWKGCKMTFK WAWARTEHIR VHTGARPYVC AEPGCGQTFR FVSDFSRHKR KTGHSTKKGR 1560 G

Sequence ? help Back to Top

Protein Sequence Length: 1561 aa Download sequence

MAASALAAEP TQEVLSWLKT LPLAPEYHPT LAEFQDPISY IFKIEKEASK FGICKIVPPV  60
PPSPKKTAIV NLNRSLAARA ACSDSSNSKS PPTFTTRQQQ IGFCPRKTRP VQKSVWQSGE  120
YYTFQQFEAK AKSFEKSYLK KCGKKGGLSP LEIETLYWRA TLDKPFSVEY ANDMPGSAFV  180
PVSAKMFREA GEGTMLGETA WNMRGVSRAK GSLLRFMKEE IPGVTSPMVY VAMMFSWFAW  240
HVEDHDLHSL NYMHMGAGKT WYGVPRDAAV AFEEVVRVQG YGGEINPLVT FAVLGEKTTV  300
MSPEVLVSAG VPCCRLVQNA GEFVVTFPRA YHTGFSHGFN CGEAANIATP EWLRVAKDAA  360
IRRASINYPP MVSHFQLLYD LALSSRTPLW IGAAPRSSRL KDKKKSEGET VIKELFVQNI  420
AENNSLLHIL GRGASVVLLP QGSSDSIYSK LRVGSHLRAK PRFPAGFCSS KEATKSPQSF  480
DYDNLTLENS QGINRVKGFY SANGPYATLS ERSTDNLCAS SSRTLNANNK RGGSANCDGL  540
SDQRLFSCVT CGILSFACVA IIQPREQAAR YLMSADCSFF NDWVAGSGIT SEGIAIRDGH  600
AVTSQQISNS GKREKCVSDG LYDVPVHAVN RQLPVADQSY EANSNTENRK ETSALGMLAL  660
TYGHSSDSEE DNADADAVLN ADDTKLMICS SEDGYQFENS GLTSNEYCKN SATLDHNPSS  720
FSVNTADQMD FQVDDYEEFG RARFDSKDSF NCSSDEIDGI GSTKKNGLST RYQDSHVNNK  780
SPSDGDIEKP MFDKTTEPVE IENIPFAPDI DEDSSRLHVF CLEHAKEVEQ QLRPIGGVHI  840
LLLCHPDYPK MEAEAKLVAE ELRMDHPWTD TMFRGATQDE EKRIQLALDS EDAIPGNGDW  900
AVKLGINLFY SANLSHSPLY SKQMPYNSVI YNAFGRSTSA NSSGKPKVYQ RRTGKLKRVV  960
AGKWCGKVWM SNQVHPLLAK RDPQEEDEDV IFHSWTMSDE KVDRKPENIQ KNETVMVNRK  1020
SAGKRKMASG SRTTKRAKPI ETEDMVSDDS VEDCIHQHHS ILRNNRSKFV ESNDAMSDDS  1080
VEDDSCKKRG RVATSKGGAY CGTDDTGSDD SLGYRSNQRR LGFCGAKLPK WGEIEPVVSD  1140
DSFEHDSSQH QRKKSKSKME KHFERQDALS DECLESGSLK QCSRIPRGKQ AKVFKNVISH  1200
DIRDDSFLWH HQRTSRSKKA KSIESEDAAS EGSLDNNSHQ HRSMPRSKPD KCVVREDAFS  1260
DDPEEDDSSI LQHWKIKRNM PSKYIERENT SDDQLDNGAN QGRRRMLRSK PVKTETIPQM  1320
KQEISRPAKR GASQTLKEEF SQSLKRGARH MLKLETPQPI KPHATNLRGK QAKRNSKFTD  1380
VESEEEQPGG PSTRLRKRTP KPTKLSEAKV KDKKQIGKKK VKNASSLKTP AGHRDSKARD  1440
EESEYLCDIE GCNMSFGSKQ ELVLHKRNIC PVKGCGKKFF SHKYLVQHRR VHMDDRPLKC  1500
PWKGCKMTFK WAWARTEHIR VHTGARPYVC AEPGCGQTFR FVSDFSRHKR KTGHSTKKGR  1560
G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	0.0	C2H2 family protein