PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022137156.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family M-type_MADS
Protein Properties Length: 366aa    MW: 41756.3 Da    PI: 6.6474
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022137156.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF65.65e-211053245
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                    + e++  rqvtfskRr+gi+KKA EL +LCd+++ +++fs+tg+
  XP_022137156.1 10 KLESTGSRQVTFSKRRHGIMKKARELAILCDIDIVLLMFSPTGR 53
                    5688999***********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    
MGRVKLKIKK LESTGSRQVT FSKRRHGIMK KARELAILCD IDIVLLMFSP TGRPAFYQGE  60
RSTIEEVITK FAQLTPQERA KRKLESLEAL KKTFKKLDHD VNIKDFVGSS SQDFEQELTN  120
EVSMLRDQIA EAHKRLSYWR NPDNINNIEH LQQMEDMIRE SLNQTRLHKE NLRRHQLLSQ  180
EFTSQLQSGM SLPLIMDEMQ AAQPLLWLPN YGTQQITLPN DPNFLQPGDV ECSMATSFPT  240
YPSYFNPGKQ IEVGISGPVD SLPHGDGALN ELSGTSCSTL QLGEQYTYPT CDGSNFQDDK  300
RLKLDMEMNL HANCVENQLN GKLELSRSLF DNEQHHWASI PGCSIPMYQS NGYHHVGSLL  360
TAYYKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18750.14e-97M-type_MADS family protein