PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022137286.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

TCP

Protein Properties

Length: 212aa MW: 23660.3 Da PI: 9.9454

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022137286.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	79.8	7.1e-25	32	109	3	82
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssa 82 g+kdrhsk+ T +g+RdRR+Rls ++a++++dLq++LG+ ++sk i+WL+ i++l+ ++ ++ +++++s+ + XP_022137286.1 32 GGKDRHSKVFTIKGLRDRRIRLSTPTAIQLYDLQNKLGLGQPSKVIDWLIDVTRFDIDKLPPLQIPKD--FDPNASVLYQ 109 78*************************************************************44444..3333333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MEAKIRNRAS SRQEGPCLRG NPRIFRVSTL FGGKDRHSKV FTIKGLRDRR IRLSTPTAIQ 60 LYDLQNKLGL GQPSKVIDWL IDVTRFDIDK LPPLQIPKDF DPNASVLYQS SMLLPQVCHF 120 DVAVKARNGG TERLLAQKLS PLVNHASLCS LQSNAMDESF CHFEPSSFPF PSMEANPDSF 180 SSSASAQLLF CPLTTPSEVS PSSLMKLRVN LR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	2e-38	TCP family protein