PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022137312.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

SBP

Protein Properties

Length: 187aa MW: 20836.1 Da PI: 9.6706

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022137312.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	135	2.4e-42	31	107	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC++dls++++yhrrhkvCe hsk+p+v++ gl+qrfCqqCsrfh+l+efDe+krsCr+rL++hn+rrrk+q+ XP_022137312.1 31 CLVDGCNSDLSSCRDYHRRHKVCELHSKTPQVTIGGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQT 107 9*************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 187 aa Download sequence
MTELEKMASS TSGSSKRARG ANNGGAQPVF CLVDGCNSDL SSCRDYHRRH KVCELHSKTP 60 QVTIGGLKQR FCQQCSRFHS LEEFDEGKRS CRKRLDGHNR RRRKPQTDLL PRSGGPFSYH 120 QGSHMLPFSS SQVFPSTTVG SHGWSSAVGA DPAALHSRNQ QLNFLEKQSL FVEHSDHGSS 180 NYKVSQE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	88	105	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	3e-54	SBP family protein